Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009514.1 Corchorus capsularis cultivar CVL-1 contig09535, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11016

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--38
2
19.0
2
100
0
76
50
0
0
50
1.00
1331--1383
27
2.0
27
82
7
65
41
7
1
49
1.42
3399--3482
33
2.7
32
78
9
93
29
17
13
39
1.88
4406--4441
18
2.0
18
100
0
72
27
33
11
27
1.91
7593--7655
31
2.0
32
90
6
101
52
7
15
23
1.69
9500--9542
15
2.9
15
85
0
59
18
48
23
9
1.76
9588--9702
26
4.4
25
74
12
106
29
39
15
15
1.89
9585--9702
53
2.2
52
88
7
168
29
38
15
16
1.89

Tables:   1

The End!