Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009515.1 Corchorus capsularis cultivar CVL-1 contig09536, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26735

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4521--4616
38
2.5
39
81
3
104
51
5
20
22
1.68
4538--4616
40
2.0
38
82
4
95
50
5
21
22
1.68
4637--4801
37
4.5
37
71
17
119
46
7
18
26
1.76
4708--4819
34
3.2
34
77
12
127
48
8
16
25
1.76
4667--4819
71
2.2
71
91
0
252
48
7
16
26
1.74
9818--10134
127
2.5
128
89
1
467
30
29
27
11
1.92
9818--10171
127
2.8
127
85
4
349
31
29
26
12
1.93
16406--16872
234
2.0
234
99
0
925
46
20
23
8
1.78
17602--17743
50
2.8
50
84
6
180
19
35
24
19
1.95
18094--18211
26
4.5
26
73
16
100
31
38
14
16
1.88
18094--18211
53
2.2
53
88
10
172
31
38
14
16
1.88

Tables:   1

The End!