Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009522.1 Corchorus capsularis cultivar CVL-1 contig09543, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19742

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1757--1782
2
13.0
2
100
0
52
50
0
0
50
1.00
2084--2109
4
6.5
4
100
0
52
76
0
0
23
0.78
3291--3315
2
12.5
2
100
0
50
52
0
0
48
1.00
3462--3488
9
3.0
9
100
0
54
77
11
11
0
0.99
6230--6254
10
2.5
10
100
0
50
64
0
36
0
0.94
6878--8313
324
4.5
322
75
8
1193
36
17
13
33
1.88
6878--8311
644
2.3
618
78
8
1444
35
17
13
33
1.88
19607--19722
33
3.5
33
77
6
103
16
34
32
16
1.91

Tables:   1

The End!