Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009523.1 Corchorus capsularis cultivar CVL-1 contig09544, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20205

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1413--1444
2
17.0
2
87
12
50
53
0
0
46
1.00
6171--6484
156
2.0
155
88
5
474
28
14
15
40
1.87
7089--7425
167
2.0
166
97
0
638
37
14
16
32
1.89
9613--9640
14
2.0
14
100
0
56
7
0
7
85
0.73
9974--9999
7
3.7
7
100
0
52
26
30
0
42
1.56
12822--12872
10
5.3
9
81
11
50
0
37
7
54
1.29
13480--13768
53
5.2
53
81
7
319
10
32
25
31
1.90
13480--13766
109
2.6
109
83
9
334
10
32
25
31
1.90
13887--13914
14
2.0
14
100
0
56
28
0
21
50
1.49
16886--16917
16
1.9
17
93
6
57
46
18
0
34
1.49
18116--18156
20
2.1
20
86
4
57
36
4
21
36
1.75

Tables:   1

The End!