Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009527.1 Corchorus capsularis cultivar CVL-1 contig09548, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42597

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1369--1402
2
17.0
2
100
0
68
50
0
0
50
1.00
11785--11953
70
2.4
70
95
0
311
42
10
12
34
1.77
17863--17897
18
1.9
18
100
0
70
28
0
5
65
1.15
17830--17896
29
2.3
29
75
7
75
26
1
7
64
1.29
18717--18759
21
2.0
21
86
0
59
30
27
11
30
1.92
31864--32596
187
4.0
186
91
5
1202
22
15
17
44
1.86
32051--32590
175
3.0
175
89
7
848
22
15
17
44
1.87
42375--42516
71
2.0
72
95
1
259
19
19
31
28
1.97

Tables:   1

The End!