Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009528.1 Corchorus capsularis cultivar CVL-1 contig09549, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22472

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1347--1375
7
4.3
7
91
8
51
0
10
0
89
0.48
4856--5017
60
2.7
61
79
6
152
39
16
16
27
1.90
4853--5048
31
6.5
29
73
13
94
39
16
16
27
1.91
4977--5051
31
2.4
31
93
0
123
45
20
13
21
1.84
5082--5183
31
3.4
31
70
15
104
23
21
20
34
1.97
8389--8438
26
2.0
26
84
4
66
30
10
8
52
1.64
11312--11459
74
2.0
74
95
0
269
21
31
29
16
1.96
11908--11938
1
31.0
1
100
0
62
0
0
0
100
0.00
17174--17253
33
2.4
33
89
0
115
11
31
40
17
1.85

Tables:   1

The End!