Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009529.1 Corchorus capsularis cultivar CVL-1 contig09550, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19215

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2816--2856
3
13.7
3
94
0
64
34
60
0
4
1.18
6186--6231
22
2.1
22
100
0
92
43
4
21
30
1.72
7934--7981
12
4.0
12
75
0
51
47
22
27
2
1.62
7939--7984
24
1.9
24
86
0
65
47
21
28
2
1.62
10511--10539
12
2.3
13
94
5
51
10
17
0
72
1.11
13711--13738
2
14.0
2
100
0
56
50
0
0
50
1.00

Tables:   1

The End!