Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009533.1 Corchorus capsularis cultivar CVL-1 contig09554, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50268

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10174--10199
2
13.0
2
100
0
52
50
0
0
50
1.00
11919--11964
22
2.1
22
91
0
74
21
0
19
58
1.39
18336--18427
29
3.2
28
84
6
112
23
21
13
41
1.88
25475--25528
2
27.5
2
89
10
85
48
0
1
50
1.11
39276--39373
46
2.1
46
100
0
196
35
20
7
36
1.80
50159--50184
2
13.0
2
100
0
52
50
0
0
50
1.00

Tables:   1

The End!