Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009536.1 Corchorus capsularis cultivar CVL-1 contig09557, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50477

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9610--9639
6
5.0
6
91
0
51
66
20
13
0
1.24
10392--10420
2
15.0
2
92
7
51
51
0
0
48
1.00
12108--12134
2
13.5
2
100
0
54
51
0
0
48
1.00
15432--15482
25
2.0
25
100
0
102
19
7
7
64
1.44
17208--17269
31
1.9
32
87
6
90
45
32
6
16
1.72
21203--21230
5
5.6
5
100
0
56
0
0
39
60
0.97
23525--23604
25
3.3
25
70
19
87
48
6
28
16
1.70
23522--23617
48
2.0
48
100
0
192
47
8
27
16
1.75
23524--23598
23
3.2
23
66
19
64
48
6
29
16
1.71
34244--34273
13
2.3
13
94
0
51
30
0
23
46
1.52
40192--40222
3
10.3
3
100
0
62
0
0
35
64
0.94
41778--41805
2
14.0
2
100
0
56
50
0
0
50
1.00
46108--46135
2
14.0
2
100
0
56
50
0
0
50
1.00
49197--49222
2
13.0
2
100
0
52
50
0
0
50
1.00

Tables:   1

The End!