Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009538.1 Corchorus capsularis cultivar CVL-1 contig09559, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  91669

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5113--5163
14
3.5
14
81
10
50
49
0
11
39
1.40
7508--7532
2
12.5
2
100
0
50
48
0
0
52
1.00
11329--11363
3
12.0
3
93
6
63
65
0
34
0
0.93
14952--14994
3
14.3
3
100
0
86
32
0
0
67
0.91
22211--22355
72
2.0
72
98
0
281
28
11
21
37
1.89
42807--42833
11
2.5
11
100
0
54
0
11
0
88
0.50
50733--50861
64
2.0
64
93
0
222
35
23
13
27
1.93
79781--79838
2
29.0
2
85
0
80
48
1
1
48
1.22

Tables:   1

The End!