Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009539.1 Corchorus capsularis cultivar CVL-1 contig09560, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24643

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4--55
2
26.0
2
100
0
104
0
50
0
50
1.00
4958--4986
12
2.3
13
94
5
51
3
13
0
82
0.79
6454--6497
21
2.1
21
83
8
54
18
27
9
45
1.79
6643--6726
33
2.6
32
84
5
105
14
34
39
11
1.83
6641--6740
33
3.1
34
77
12
102
16
30
37
17
1.91
22264--22289
3
8.7
3
100
0
52
69
30
0
0
0.89
24251--24288
2
19.0
2
100
0
76
50
0
0
50
1.00

Tables:   1

The End!