Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009540.1 Corchorus capsularis cultivar CVL-1 contig09561, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25501

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3522--3555
18
2.0
17
88
11
52
52
0
5
41
1.25
11715--11745
13
2.4
13
94
0
53
90
0
9
0
0.46
17849--17900
26
2.0
25
88
3
77
17
9
23
50
1.75
20545--21490
332
2.9
329
87
4
1252
36
15
14
32
1.88
21536--22721
331
3.6
331
89
2
1779
36
16
15
31
1.90
22783--24962
333
6.6
333
89
3
3127
34
18
15
32
1.92
22783--25496
653
4.2
653
87
5
3511
33
17
15
32
1.92

Tables:   1

The End!