Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009541.1 Corchorus capsularis cultivar CVL-1 contig09562, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3689

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--2482
324
7.5
333
87
4
3442
33
18
15
32
1.91
2448--2518
34
2.1
34
100
0
142
33
15
14
36
1.87
3259--3422
71
2.3
69
90
2
247
34
24
34
7
1.83
3248--3422
69
2.5
70
87
3
257
34
24
33
6
1.82
3386--3462
40
1.9
40
91
0
127
27
27
36
9
1.87
3484--3516
17
1.9
17
88
11
50
48
30
21
0
1.50
3600--3686
2
43.5
2
100
0
174
49
0
50
0
1.00

Tables:   1

The End!