Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009542.1 Corchorus capsularis cultivar CVL-1 contig09563, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39356

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1331--1399
34
2.0
34
97
0
129
42
24
7
26
1.80
7509--7543
2
17.5
2
100
0
70
51
0
0
48
1.00
9770--9818
23
2.2
22
78
7
55
75
2
0
22
0.90
26234--26351
55
2.2
53
93
3
200
27
22
0
49
1.56
28809--28847
2
19.5
2
100
0
78
0
0
51
48
1.00
36280--36361
29
2.7
30
83
9
87
14
20
25
39
1.91
39319--39356
2
19.0
2
100
0
76
50
0
0
50
1.00

Tables:   1

The End!