Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009551.1 Corchorus capsularis cultivar CVL-1 contig09572, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27040

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4671--4707
15
2.4
16
90
4
58
29
2
21
45
1.65
4723--4770
24
2.0
24
100
0
96
33
4
16
45
1.67
21650--21723
33
2.2
32
83
9
87
13
31
37
17
1.89
21717--21809
34
2.8
33
88
1
96
12
34
34
18
1.89
21729--21809
34
2.4
34
93
0
135
14
30
35
18
1.91
22221--22291
33
2.2
33
85
7
92
9
33
39
16
1.82
22619--22697
39
2.0
39
92
0
131
29
21
11
37
1.88
26415--26455
2
21.0
2
80
14
50
48
2
2
46
1.28
26977--27023
22
2.1
23
88
4
69
57
8
2
31
1.41
26988--27036
22
2.2
22
82
7
55
59
6
2
32
1.34

Tables:   1

The End!