Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009553.1 Corchorus capsularis cultivar CVL-1 contig09574, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15240

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1416--1470
26
2.1
26
82
0
65
29
18
12
40
1.87
1380--1602
90
2.5
91
90
1
340
32
19
12
35
1.89
5769--5842
38
1.9
38
94
0
130
35
6
17
40
1.76
12460--12486
2
13.5
2
100
0
54
51
0
0
48
1.00
14457--14523
31
2.2
31
86
5
93
50
11
16
20
1.76
14641--14752
31
3.7
31
78
4
93
30
16
12
40
1.86

Tables:   1

The End!