Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009571.1 Corchorus capsularis cultivar CVL-1 contig09592, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18260

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
402--452
26
2.0
26
92
7
86
31
3
21
43
1.71
3243--3299
27
2.0
29
93
6
100
47
7
21
24
1.75
4261--4307
19
2.4
20
92
7
87
10
8
31
48
1.68
6410--6464
27
2.0
27
85
0
74
49
7
18
25
1.73
11770--11830
29
2.1
29
93
0
104
34
16
19
29
1.94
11835--11964
33
3.9
33
90
0
197
27
20
20
31
1.97
12264--12308
17
2.5
19
82
14
67
57
4
24
13
1.54
12915--12945
15
2.1
15
100
0
62
25
12
12
48
1.77
15661--15686
2
13.0
2
100
0
52
50
0
0
50
1.00

Tables:   1

The End!