Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009573.1 Corchorus capsularis cultivar CVL-1 contig09594, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9102

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1014--1078
31
2.2
30
83
10
80
43
15
20
21
1.88
2298--2673
202
1.9
203
92
2
641
26
19
18
35
1.95
2873--2939
31
2.1
31
86
8
91
31
20
4
43
1.72
2845--3144
148
2.0
147
91
4
487
37
13
6
42
1.70
4135--4371
121
2.0
116
84
7
307
36
10
8
45
1.68
4423--4459
19
1.9
19
89
10
58
29
5
0
64
1.15
4552--4756
22
9.3
22
78
8
175
33
9
17
39
1.83
5058--5206
44
3.3
44
71
7
129
44
9
13
32
1.75
4990--5208
22
9.7
22
68
14
90
42
9
14
34
1.77
5291--5342
20
2.6
20
90
0
77
46
13
13
26
1.80
5310--5829
22
23.7
22
68
7
191
39
10
15
35
1.81
5617--5678
23
2.8
22
80
4
61
33
12
12
40
1.82
5705--5749
21
2.1
21
87
0
63
55
2
13
28
1.50
6387--6541
51
3.0
51
99
0
301
33
17
10
38
1.85
9054--9102
2
24.5
2
100
0
98
48
0
51
0
1.00

Tables:   1

The End!