Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009575.1 Corchorus capsularis cultivar CVL-1 contig09596, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38525

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1454--1511
19
2.9
20
84
5
73
36
10
24
29
1.88
1469--1609
67
2.1
67
90
0
219
37
12
19
31
1.88
24333--24525
94
2.0
95
92
1
325
29
18
15
37
1.91
24856--24902
19
2.4
19
86
10
60
6
8
10
74
1.22
30261--30762
271
1.9
271
99
0
995
37
19
12
30
1.88
37850--37905
25
2.2
24
76
14
60
50
1
1
46
1.22
38496--38524
2
14.5
2
100
0
58
51
0
0
48
1.00

Tables:   1

The End!