Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009581.1 Corchorus capsularis cultivar CVL-1 contig09602, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27679

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1329--1378
24
2.0
25
96
3
93
38
8
26
28
1.84
8801--8831
4
7.8
4
92
0
53
19
0
3
77
0.90
8801--8831
16
1.9
16
100
0
62
19
0
3
77
0.90
20356--20385
15
2.0
15
93
0
51
10
3
46
40
1.54
23399--23427
1
29.0
1
100
0
58
100
0
0
0
0.00
24146--24194
9
5.4
9
90
0
71
2
14
57
26
1.48
25421--25466
17
2.8
16
80
9
56
58
2
0
39
1.10

Tables:   1

The End!