Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009582.1 Corchorus capsularis cultivar CVL-1 contig09603, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13509

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2193--2243
13
3.6
14
73
7
50
62
3
1
31
1.24
4899--4932
15
2.2
16
89
5
52
64
0
0
35
0.94
5021--5083
24
2.6
24
94
0
108
38
0
4
57
1.20
5016--5083
11
5.7
11
80
14
73
36
1
4
57
1.28
5021--5075
13
4.4
13
84
9
78
36
0
5
58
1.21
5224--5259
10
3.6
10
92
0
54
30
25
5
38
1.78
5299--5365
26
2.6
26
95
0
116
53
11
1
32
1.47
5299--5342
15
3.2
15
75
24
60
54
11
0
34
1.36
6179--6212
13
2.5
13
90
4
50
29
0
0
70
0.87
6180--6222
20
2.1
20
86
4
59
30
2
2
65
1.18
6414--6458
22
2.0
22
83
8
56
20
35
31
13
1.91
9839--9890
27
1.9
27
92
0
86
23
13
38
25
1.91
11744--11770
10
2.7
10
100
0
54
51
18
7
22
1.70

Tables:   1

The End!