Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009590.1 Corchorus capsularis cultivar CVL-1 contig09611, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20026

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23--70
26
1.9
24
87
8
69
14
2
10
72
1.19
3692--3719
3
9.3
3
100
0
56
64
0
35
0
0.94
8655--8684
1
30.0
1
93
0
51
96
0
3
0
0.21
8713--8769
30
1.9
29
82
3
69
40
7
17
35
1.77
11509--11609
52
2.0
51
90
5
159
52
18
1
26
1.56
19536--19573
16
2.4
16
86
0
58
81
0
0
18
0.69

Tables:   1

The End!