Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009594.1 Corchorus capsularis cultivar CVL-1 contig09615, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27949

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15019--15049
1
31.0
1
100
0
62
100
0
0
0
0.00
21268--21308
21
2.0
21
95
0
73
39
17
26
17
1.91
24755--25076
50
6.5
50
84
4
406
18
30
17
33
1.94
24743--25076
147
2.3
147
86
6
460
18
29
16
35
1.93
26545--26570
10
2.6
10
100
0
52
30
30
0
38
1.58
26607--26724
26
4.7
26
77
9
120
53
11
1
33
1.48
26607--26674
15
5.1
15
70
26
62
52
11
1
33
1.47
26616--26709
14
7.2
13
69
21
63
54
11
2
31
1.48
26730--26755
12
2.2
12
100
0
52
76
0
0
23
0.78
27135--27177
18
2.4
18
88
3
70
41
16
16
25
1.88

Tables:   1

The End!