Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009606.1 Corchorus capsularis cultivar CVL-1 contig09627, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26148

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4851--4949
50
2.0
50
85
0
135
44
15
13
27
1.83
15054--15090
1
37.0
1
100
0
74
0
0
0
100
0.00
17440--17476
20
2.0
20
89
10
60
29
13
16
40
1.86
21322--21530
33
6.2
33
87
3
267
6
44
8
41
1.60
22332--22356
11
2.3
11
100
0
50
28
0
32
40
1.57
23873--23980
53
2.0
53
98
0
207
22
39
8
29
1.83
25417--25694
153
1.8
150
93
3
477
39
12
15
31
1.85
25712--25754
21
2.0
21
86
0
59
18
39
9
32
1.83

Tables:   1

The End!