Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009609.1 Corchorus capsularis cultivar CVL-1 contig09630, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12150

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3474--3527
26
2.1
26
86
13
76
42
0
0
57
0.98
6927--7176
136
1.8
136
92
1
421
23
21
27
27
1.99
7137--7217
40
2.0
40
100
0
162
27
30
22
19
1.98
8101--8330
70
3.2
70
79
10
255
36
12
0
50
1.47
8101--8340
78
3.2
77
87
6
307
36
12
0
50
1.46
8430--8590
60
2.7
60
84
1
207
37
18
18
26
1.93
8617--8784
31
5.6
30
73
16
150
26
19
19
34
1.96
8616--8785
60
2.8
60
89
2
252
27
20
18
34
1.96

Tables:   1

The End!