Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009612.1 Corchorus capsularis cultivar CVL-1 contig09633, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28859

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4076--4119
21
2.2
20
84
12
54
11
6
27
54
1.61
11452--11652
102
2.0
102
92
0
339
34
10
16
38
1.84
15503--15940
169
2.6
164
85
4
574
40
15
14
29
1.87
19950--19990
2
20.5
2
100
0
82
48
0
0
51
1.00
20366--20415
3
16.7
3
100
0
100
32
0
0
68
0.90
20409--20440
16
2.0
16
93
0
55
34
9
0
56
1.32
22987--23126
22
6.6
22
75
15
116
39
12
10
37
1.79
22989--23126
60
2.2
64
89
7
212
39
12
10
37
1.78
23110--23259
22
6.8
21
68
10
77
44
10
10
35
1.73
23005--23148
66
2.3
60
83
7
171
39
13
10
36
1.80
23043--23148
44
2.4
44
75
12
110
41
14
9
34
1.78
23032--23163
66
2.0
66
85
2
176
42
12
9
34
1.76
23436--23483
22
2.2
22
84
0
60
41
6
12
39
1.68
23492--23550
22
2.8
21
80
12
75
33
5
18
42
1.72
24661--24697
17
2.2
17
90
4
58
56
0
0
43
0.99
28214--28261
24
2.0
24
100
0
96
16
25
4
54
1.60

Tables:   1

The End!