Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009615.1 Corchorus capsularis cultivar CVL-1 contig09636, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46678

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8368--8392
13
1.9
13
100
0
50
40
8
8
44
1.63
11986--12012
14
1.9
14
100
0
54
37
14
11
37
1.82
15148--15176
14
2.1
14
100
0
58
51
6
13
27
1.66
18217--18284
28
2.4
28
80
4
93
26
23
22
27
1.99
18663--18809
73
2.0
73
93
0
249
39
15
17
27
1.90
18760--19228
156
3.0
156
87
3
658
32
19
17
30
1.95
32350--32408
29
2.1
29
93
6
104
38
10
13
37
1.79
36081--36117
18
2.1
18
89
0
56
13
29
0
56
1.37
36265--36310
21
2.2
21
100
0
92
41
4
17
36
1.69
41282--41337
27
2.1
27
83
6
69
35
7
8
48
1.62

Tables:   1

The End!