Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009618.1 Corchorus capsularis cultivar CVL-1 contig09639, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15909

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3934--3973
13
3.1
13
79
13
55
40
20
5
35
1.74
5233--5292
24
2.6
22
80
10
75
45
21
26
6
1.77
9367--9391
13
1.9
13
100
0
50
48
0
0
52
1.00
10763--10792
13
2.3
13
100
0
60
33
16
36
13
1.88
11204--11299
37
2.6
37
80
9
115
14
18
9
57
1.64
11357--11504
22
6.7
22
72
10
72
40
11
14
33
1.82
11601--12186
22
26.7
22
69
13
165
39
9
14
36
1.79
11770--11893
46
2.7
44
81
9
142
38
8
15
37
1.77
11971--12056
45
1.9
45
83
4
111
34
10
15
39
1.81
12156--12306
62
2.5
62
83
5
198
42
9
13
35
1.76
15289--15325
17
2.2
17
100
0
74
16
10
10
62
1.55

Tables:   1

The End!