Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009624.1 Corchorus capsularis cultivar CVL-1 contig09645, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23029

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2035--2092
28
2.1
28
100
0
116
31
27
6
34
1.83
7662--7721
29
2.1
29
93
0
102
28
25
8
38
1.84
10819--10923
53
2.0
51
94
3
183
40
15
5
38
1.71
21379--21407
2
14.5
2
100
0
58
48
0
0
51
1.00
22358--22430
29
2.4
30
81
4
76
19
16
19
45
1.86
22711--22739
2
15.0
2
92
7
51
51
0
0
48
1.00

Tables:   1

The End!