Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009625.1 Corchorus capsularis cultivar CVL-1 contig09646, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46620

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15596--15646
21
2.4
21
87
9
77
41
13
3
41
1.63
15770--15819
22
2.2
23
82
7
66
22
12
12
54
1.69
15777--15818
22
1.9
22
95
0
75
19
9
14
57
1.64
22939--23252
36
8.7
36
88
1
371
25
24
24
25
2.00
28605--28651
9
5.2
9
94
0
76
10
42
12
34
1.78
34774--34810
15
2.5
15
95
0
65
27
37
0
35
1.57
46583--46619
3
12.3
3
100
0
74
0
35
0
64
0.94

Tables:   1

The End!