Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009632.1 Corchorus capsularis cultivar CVL-1 contig09653, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53971

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11741--11780
20
2.0
21
95
5
73
20
20
27
32
1.97
17311--17346
16
2.2
16
95
0
63
25
16
13
44
1.85
27173--27200
5
5.6
5
100
0
56
21
17
0
60
1.36
27415--27472
30
1.9
30
96
0
107
46
3
1
48
1.29
33709--34222
130
3.9
130
88
2
710
32
16
13
36
1.88
36577--36664
45
1.9
46
88
2
133
25
20
17
37
1.93
36861--36895
2
18.0
2
94
5
63
51
0
0
48
1.00
36861--36893
17
1.9
17
100
0
66
51
0
0
48
1.00
36861--36897
19
1.9
19
100
0
74
51
0
0
48
1.00
37202--37235
12
2.8
12
90
0
59
55
0
0
44
0.99
39989--40227
134
1.8
131
88
4
372
41
13
7
37
1.73
39989--40185
67
2.9
67
65
10
159
43
13
7
36
1.71
40325--40449
35
3.4
35
65
19
83
37
8
12
40
1.75
40326--40472
75
2.0
75
93
0
249
40
9
10
39
1.73
48232--48273
2
21.0
2
100
0
84
50
0
0
50
1.00

Tables:   1

The End!