Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009633.1 Corchorus capsularis cultivar CVL-1 contig09654, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16441

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1920--1946
1
27.0
1
100
0
54
100
0
0
0
0.00
7703--7747
3
15.0
3
100
0
90
66
0
0
33
0.92
8180--8218
6
6.5
6
93
0
69
69
0
12
17
1.19
9887--9968
41
2.0
41
92
0
137
37
10
20
30
1.87
10895--10923
2
14.5
2
100
0
58
48
0
0
51
1.00
13541--13565
12
2.1
12
100
0
50
40
8
16
36
1.77

Tables:   1

The End!