Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009634.1 Corchorus capsularis cultivar CVL-1 contig09655, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35257

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8263--9042
434
1.8
432
83
2
1035
30
13
13
41
1.84
14572--14629
30
2.0
30
82
3
73
20
32
10
36
1.87
15567--15597
2
15.5
2
100
0
62
51
0
0
48
1.00
19143--19178
18
2.0
18
100
0
72
33
16
16
33
1.92
20049--20080
11
2.9
11
95
0
55
46
6
6
40
1.54
19912--20257
176
2.0
177
93
1
597
33
21
7
37
1.82
20225--20268
11
3.9
11
85
5
61
45
6
4
43
1.51
20221--20268
23
2.1
22
92
3
78
45
6
4
43
1.48
20446--20487
21
2.0
21
100
0
84
9
23
4
61
1.45
22602--22659
30
1.9
30
82
3
71
37
15
5
41
1.70
25676--25734
22
2.8
21
77
10
59
40
0
5
54
1.23
26418--26455
16
2.5
15
87
8
58
42
23
5
28
1.76
29608--29641
12
2.9
12
91
4
52
38
11
0
50
1.39
31664--31695
2
16.0
2
100
0
64
50
0
0
50
1.00

Tables:   1

The End!