Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009635.1 Corchorus capsularis cultivar CVL-1 contig09656, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25975

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
350--393
3
14.7
3
95
0
79
65
2
0
31
1.05
586--622
3
12.3
3
100
0
74
64
0
0
35
0.94
1104--1176
35
2.1
35
89
5
112
32
10
5
50
1.60
1903--1928
12
2.2
12
100
0
52
26
0
7
65
1.20
12850--12931
38
2.2
38
100
0
164
46
2
42
8
1.47
12850--12908
18
3.0
21
63
27
56
44
3
44
8
1.51
15631--15656
2
13.0
2
100
0
52
50
0
0
50
1.00
19355--19400
16
2.9
16
75
12
58
63
15
4
17
1.47
21374--21436
28
2.2
28
100
0
126
38
19
3
39
1.67

Tables:   1

The End!