Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: AWWV01009636.1 Corchorus capsularis cultivar CVL-1 contig09657, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 60160
ACGTcount: A:0.34, C:0.16, G:0.18, T:0.33
Found at i:368 original size:2 final size:2
Alignment explanation
Indices: 361--390 Score: 60
Period size: 2 Copynumber: 15.0 Consensus size: 2
351 AAAACTAGTG
361 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA
1 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA
391 AAAGCTTCGT
Statistics
Matches: 28, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 28 1.00
ACGTcount: A:0.50, C:0.00, G:0.00, T:0.50
Consensus pattern (2 bp):
TA
Found at i:598 original size:11 final size:11
Alignment explanation
Indices: 582--608 Score: 54
Period size: 11 Copynumber: 2.5 Consensus size: 11
572 CTGTTAGAAG
582 TGCCACGCTAA
1 TGCCACGCTAA
593 TGCCACGCTAA
1 TGCCACGCTAA
604 TGCCA
1 TGCCA
609 TACTAAGCCC
Statistics
Matches: 16, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
11 16 1.00
ACGTcount: A:0.26, C:0.37, G:0.19, T:0.19
Consensus pattern (11 bp):
TGCCACGCTAA
Found at i:8901 original size:340 final size:335
Alignment explanation
Indices: 7909--8901 Score: 1091
Period size: 340 Copynumber: 3.0 Consensus size: 335
7899 ACATTGGATG
* * ** *
7909 TTTACGAGCATCTGAATCTTATTTCCATTTAATTAGAAATTAATTTGGAAAAAATAGGAAAAACG
1 TTTACGAGCATCTGAATCTTGTTTCGATTTAATTAGAAATTAATTCAGAAAAAATATGAAAAACG
* *
7974 ATATTAGAAGTGTCAAAAGTCCTTCAATCTTTTTTGCGTTAAATTATATATTTTTTATGAGTATT
66 ATATTAAAAGCGTCAAAAGTCCTTCAATCTTTTTTGCGTTAAATTATATATTTTTTATGAGTA-T
** * * * *
8039 TTAGCCAAAAATTGAGGAAATATCTTTCGGGTCAATTTTTACAAAAATTTAGCCGAAATCGTGTA
130 TT-GATAAAAATTGAGGAAATATCTTTCTGGTCATTTTTTGCAAAATTTTAGCCGAAATCGTGTA
** * * * * *
8104 ATAACTATCATAGTTTTTGGATAAAAAAGCGTTCTGGGGCCCGACTCAGTTTTGCATGATTTTTG
194 ATAAC-ATCACGGTTTTTGGCTAAAAACGCGTTCCGGGGCTCGGCTCAGTTTTGCATGATTTTTG
* * * * *
8169 GTGCCAAGA---C-T-AGATATCCATATTCATCTAATCAAATCTCAGCCACA--TT----GGAT-
258 GCGCCGAGACTCCTTGAAATATCTATATTCATCTAATCAAATCTCAGCCACATTTTACAAGCATC
*
8222 TTAGGAATTTGTT
323 TAAGGAATTTGTT
* * * *
8235 TTTACAAGCATCTGAATCTTGTTTCGATTTAGTTAGAAATTAATTCAG-AAAAATATGAAAGATG
1 TTTACGAGCATCTGAATCTTGTTTCGATTTAATTAGAAATTAATTCAGAAAAAATATGAAAAACG
* * * * *
8299 ATATTAAAAACGTAAAAAGTCCTCCAATCTTTTTGGCGTTAAATTATTTATTTTTTATGAGTATT
66 ATATTAAAAGCGTCAAAAGTCCTTCAATCTTTTTTGCGTTAAATTATATATTTTTTATGAGTATT
* * * * * *
8364 TAATCAAAAATTGAGG-AATAACTTTTTGGGTCCTTTTTTGTAAAATTTTAGCCAAAATCGTGTA
131 TGAT-AAAAATTGAGGAAATATCTTTCT-GGTCATTTTTTGCAAAATTTTAGCCGAAATCGTGTA
* * * ** *
8428 CTAACCATCACGGTTTTTGGCTTAAAACGCGTTTCGGAACCTCGGGTCAGTTTTGCATGATTTTT
194 ATAA-CATCACGGTTTTTGGCTAAAAACGCGTTCCGG-GGCTCGGCTCAGTTTTGCATGATTTTT
** * * * * **
8493 GGCATCGACACTCCTTGAAATATCTATATTTATCTAATAAAATCTTAGCCACATTGCATCTAAGC
257 GGCGCCGAGACTCCTTGAAATATCTATATTCATCTAATCAAATCTCAGCCACATTTTA-C-AAGC
8558 ATCTAAGGAA-TTGTT
320 ATCTAAGGAATTTGTT
* * * *
8573 TTTACGAGCGTCTAAATCTTGTTTAGATTGAATTAGAAATTAATTCAGAAAAAATATGAAAAACG
1 TTTACGAGCATCTGAATCTTGTTTCGATTTAATTAGAAATTAATTCAGAAAAAATATGAAAAACG
* * *
8638 ATATTAAAAGCGTCAAAA-TCCCTTGAATTTTTTTTTGCGTTGAATTATATATTTTTTATGAGTA
66 ATATTAAAAGCGTCAAAAGT-CCTTCAA-TCTTTTTTGCGTTAAATTATATATTTTTTATGAGTA
8702 TTATCGATAAAAATTGAGGAAATATCTTTCTGGTCATTTTTTGCAAAATTTTAGCCGAAATCGTG
129 TT-T-GATAAAAATTGAGGAAATATCTTTCTGGTCATTTTTTGCAAAATTTTAGCCGAAATCGTG
* * *
8767 TAATAATCATCACGGTTTTAGGCTAAAAACGCGTTCCGGGGCTCGGTTCAGTTTTGAATGATTTT
192 TAATAA-CATCACGGTTTTTGGCTAAAAACGCGTTCCGGGGCTCGGCTCAGTTTTGCATGATTTT
* * * * * *
8832 TAGCGCCGAGACTCCTTGAAATATCTATATTCATATAACCAAATCCCAACCATTATTTTTACAAG
256 TGGCGCCGAGACTCCTTGAAATATCTATATTCATCTAATCAAATCTCAGCCA-CA-TTTTACAAG
8897 CATCT
319 CATCT
8902 GAATCATGTT
Statistics
Matches: 541, Mismatches: 100, Indels: 38
0.80 0.15 0.06
Matches are distributed among these distances:
323 8 0.01
324 71 0.13
325 97 0.18
326 42 0.08
328 1 0.00
329 1 0.00
330 31 0.06
338 51 0.09
339 41 0.08
340 105 0.19
341 79 0.15
342 14 0.03
ACGTcount: A:0.33, C:0.15, G:0.15, T:0.37
Consensus pattern (335 bp):
TTTACGAGCATCTGAATCTTGTTTCGATTTAATTAGAAATTAATTCAGAAAAAATATGAAAAACG
ATATTAAAAGCGTCAAAAGTCCTTCAATCTTTTTTGCGTTAAATTATATATTTTTTATGAGTATT
TGATAAAAATTGAGGAAATATCTTTCTGGTCATTTTTTGCAAAATTTTAGCCGAAATCGTGTAAT
AACATCACGGTTTTTGGCTAAAAACGCGTTCCGGGGCTCGGCTCAGTTTTGCATGATTTTTGGCG
CCGAGACTCCTTGAAATATCTATATTCATCTAATCAAATCTCAGCCACATTTTACAAGCATCTAA
GGAATTTGTT
Found at i:9778 original size:333 final size:328
Alignment explanation
Indices: 9147--9935 Score: 867
Period size: 333 Copynumber: 2.4 Consensus size: 328
9137 ACAGAGGGAG
* *
9147 TAATTCAGAAAAAATAGGAAAAAAAAAATAGAAGCGTGAACAACCCTTCAATATTTTTGGGGTTG
1 TAATTCAGAAAAAATAGGAAAAAAAAAATAGAAGCGTGAAAAACCCTTCAATATTTTTGGCGTTG
* * * *
9212 AATTATATATTTTCTATGAGTATTGTGGCTAAAAATTGAGAAAAATATTTCGGGTCAATTTTTGC
66 AATTATATATTTTCTATGAGTATTGTAGCAAAAAATTGAGAAAAATATTTCCGGTCAATTTTTAC
* **
9277 AAAATATTAACTGAAATTGTGAAACATCATATTTTTTTGGGCTAAAAACGCGTTCCGGGGCCACA
131 AAAATATTAACTGAAATTGTGAAACATCATATGTTTTTGGGCTAAAAACGCGTTCCAAGGCCACA
* * * *
9342 AGTTAGTTTTGCATGATTTTTGGCGTCTAGACTCCTTGAAATATCTATATTCATCTAATCAAATC
196 AGTCAGTTTTGCATGATTTTTGGCGTCTAGACTCCTTGAAATACCGAAATTCATCTAATCAAATC
* *
9407 TCATCCACATTGGATTTAAGAATTTATTTTTACGAGCATCTTAATCTGGTTTCGATTTAATTTAG
261 TCATCCACATTGCATTTAAGAATTTATTTTTACGAGCATCTGAATCTGGTTTCGATTTAA-TTAG
9472 AAAT
325 AAAT
* * * * *
9476 TAATTCGGAAAAAGTAGGAAAAAAGATATTAGAAGCGT-AAAAAGCCCTTCAATATTTTTTGCGT
1 TAATTCAGAAAAAATAGGAAAAAA-AAAATAGAAGCGTGAAAAA-CCCTTCAATATTTTTGGCGT
* * *
9540 TGAATTATATATTCTT-TATGAGTATTTTAGCAAAAAATTGAGGAAATATCTTTCCGGTCAATTT
64 TGAATTATATATT-TTCTATGAGTATTGTAGCAAAAAATTGA-GAAAAATATTTCCGGTCAATTT
*** *
9604 TTACAAAAT-TTTGGTCGAAATCATGT-AATA-ATCATCATGGTTTTT-GGCTGAAAACGCGTTC
127 TTACAAAATATTAACT-GAAAT--TGTGAA-ACATCAT-AT-GTTTTTGGGCTAAAAACGCGTTC
* * *
9665 CAAGGCCCCGAGTCAGTTTTGCATGATTTTTGGCGT-TAAGACTCCTTGAGATACCGAAATTCAT
186 CAAGGCCACAAGTCAGTTTTGCATGATTTTTGGCGTCT-AGACTCCTTGAAATACCGAAATTCAT
* * * *
9729 CTAATCAAATCTCAGT-GACATTGCATTTAAGGATTTGTTTTTACGAGCATCTGAATCTTGTTTC
250 CTAATCAAATCTCA-TCCACATTGCATTTAAGAATTTATTTTTACGAGCATCTGAATCTGGTTTC
9793 GATTTAATTAGAAAT
314 GATTTAATTAGAAAT
* * * ** * * * * *
9808 TAATTTATAAAAAATATG--AAAAACGAT---A---TGAAAAGCCCTCCAATCTTTTTGGCATTA
1 TAATTCAGAAAAAATAGGAAAAAAAAAATAGAAGCGTGAAAAACCCTTCAATATTTTTGGCGTTG
* * * *
9865 AATTATATATATTTC-ATGAGTATTTTAGCCAAAAATTGAGTAAAAA-ATTTTCTGGTCATTTTT
66 AATTATATAT-TTTCTATGAGTATTGTAGCAAAAAATTGAG-AAAAATA-TTTCCGGTCAATTTT
*
9928 TGCAAAAT
128 TACAAAAT
9936 TCTAGCCAAA
Statistics
Matches: 389, Mismatches: 54, Indels: 40
0.81 0.11 0.08
Matches are distributed among these distances:
322 1 0.00
323 77 0.20
324 5 0.01
326 1 0.00
329 28 0.07
330 71 0.18
331 34 0.09
332 29 0.07
333 137 0.35
334 6 0.02
ACGTcount: A:0.35, C:0.13, G:0.16, T:0.36
Consensus pattern (328 bp):
TAATTCAGAAAAAATAGGAAAAAAAAAATAGAAGCGTGAAAAACCCTTCAATATTTTTGGCGTTG
AATTATATATTTTCTATGAGTATTGTAGCAAAAAATTGAGAAAAATATTTCCGGTCAATTTTTAC
AAAATATTAACTGAAATTGTGAAACATCATATGTTTTTGGGCTAAAAACGCGTTCCAAGGCCACA
AGTCAGTTTTGCATGATTTTTGGCGTCTAGACTCCTTGAAATACCGAAATTCATCTAATCAAATC
TCATCCACATTGCATTTAAGAATTTATTTTTACGAGCATCTGAATCTGGTTTCGATTTAATTAGA
AAT
Found at i:10081 original size:323 final size:319
Alignment explanation
Indices: 9190--10167 Score: 816
Period size: 333 Copynumber: 3.0 Consensus size: 319
9180 GCGTGAACAA
* ** * * * *
9190 CCCTTCAATATTTTTGGGGTTGAATTATATATT-TTCTATGAGTATTGTGGCTAAAAATTGAG-A
1 CCCTCCAATATTTTTGGCATTAAATTATATATTCTTC-ATGAGTATTTTAGCAAAAAATTGAGAA
* * * * ** *
9253 AAAATATTTCGGGTCAATTTTTGCAAAATAT-TAACTGAAAT--TGTGAA-ACATCAT-AT-TTT
65 AAAATCTTTCCGGTCAATTTTTACAAAAT-TCTAGCCAAAATCATGT-AATA-ATCATCATGATT
* ** * * * * *
9312 TTTGGGCTAAAAACGCGTTCCGGGGCCACAAGTTAGTTTTGCATGATTTTTGGCGTCTAGACTCC
127 TTT-GGCTCAAAACGCGTTCCAAGGCCCCGAGTCAATGTTGCATGATTTTTGGCG-CTAGACTCC
* *
9377 TTGAAATATCTATATTCATCTAATCAAATCTCATCCACATTGGATTTAAGAATTTATTTTTACGA
190 TTGAAATATCTATATTCATCTAATCAAATCTCATCCAC-----ATTTAAGGATTTGTTTTTACGA
* * * * *
9442 GCATCTTAATCTGGTTTCGATTTAATTTAGAAATTAATTCGGAAAAAGTAGGAAAAAAGATATTA
250 GCATCTGAATCTTGTTTCGATTTAA-TTAGAAATTAATTCAGAAAAAATAGGAAAAACGATA-T-
9507 GAAGCGTAAAAAG
312 --A--G-AAAAAG
* * * * * *
9520 CCCTTCAATATTTTTTGCGTTGAATTATATATTCTTTATGAGTATTTTAGCAAAAAATTGAGGAA
1 CCCTCCAATATTTTTGGCATTAAATTATATATTCTTCATGAGTATTTTAGCAAAAAATTGAGAAA
* * * * * *
9585 ATATCTTTCCGGTCAATTTTTACAAAATTTTGGTCGAAATCATGTAATAATCATCATGGTTTTTG
66 AAATCTTTCCGGTCAATTTTTACAAAATTCTAGCCAAAATCATGTAATAATCATCATGATTTTTG
* * * * *
9650 GCTGAAAACGCGTTCCAAGGCCCCGAGTCAGTTTTGCATGATTTTTGGCGTTAAGACTCCTTGAG
131 GCTCAAAACGCGTTCCAAGGCCCCGAGTCAATGTTGCATGATTTTTGGCGCT-AGACTCCTTGAA
* * * *
9715 ATACCGAAATTCATCTAATCAAATCTCAGTGACATTGCATTTAAGGATTTGTTTTTACGAGCATC
195 ATATCTATATTCATCTAATCAAATCTCA-T-CCA---CATTTAAGGATTTGTTTTTACGAGCATC
* * *
9780 TGAATCTTGTTTCGATTTAATTAGAAATTAATTTATAAAAAATATGAAAAACGATAT-G-AAAAG
255 TGAATCTTGTTTCGATTTAATTAGAAATTAATTCAGAAAAAATAGGAAAAACGATATAGAAAAAG
* *
9843 CCCTCCAATCTTTTTGGCATTAAATTATATATAT-TTCATGAGTATTTTAGCCAAAAATTGAGTA
1 CCCTCCAATATTTTTGGCATTAAATTATATAT-TCTTCATGAGTATTTTAGCAAAAAATTGAG-A
* * * ** * *
9907 AAAAAT-TTTCTGGTCATTTTTTGCAAAATTCTAGCCAAAATTGTGTACTTTAGTCGAAATCATG
64 AAAAATCTTTCCGGTCAATTTTTACAAAATTCTAGCCAAAATCATGTA--ATAATC---ATCATG
* * * *
9971 ATTTTTTGCTCAAAACGTGTTCC-GGGACCCCG-GTTCAATGTTGCATGATTTTTGGTGCTGAGA
124 ATTTTTGGCTCAAAACGCGTTCCAAGG-CCCCGAG-TCAATGTTGCATGATTTTTGGCGCT-AGA
* **** *
10034 CTCCTTGAAATATCTATATTCATCTAACCAAATCTCATCCACATTTAAGGATTTG-CAAAACAAG
186 CTCCTTGAAATATCTATATTCATCTAATCAAATCTCATCCACATTTAAGGATTTGTTTTTACGAG
** *
10098 CATCTGATTAATAATATTTCGATTTAATTAGAAATTAATTCAGAAAATAATAGGAAAAACGATAT
251 CATCTG---AATCTTGTTTCGATTTAATTAGAAATTAATTCAGAAAA-AATAGGAAAAACGATA-
10163 TAGAA
311 TAGAA
10168 GTATGAAAAA
Statistics
Matches: 534, Mismatches: 84, Indels: 61
0.79 0.12 0.09
Matches are distributed among these distances:
322 10 0.02
323 104 0.19
324 6 0.01
325 38 0.07
326 17 0.03
327 5 0.01
328 87 0.16
329 1 0.00
330 54 0.10
331 35 0.07
332 38 0.07
333 130 0.24
334 6 0.01
335 2 0.00
338 1 0.00
ACGTcount: A:0.34, C:0.14, G:0.16, T:0.37
Consensus pattern (319 bp):
CCCTCCAATATTTTTGGCATTAAATTATATATTCTTCATGAGTATTTTAGCAAAAAATTGAGAAA
AAATCTTTCCGGTCAATTTTTACAAAATTCTAGCCAAAATCATGTAATAATCATCATGATTTTTG
GCTCAAAACGCGTTCCAAGGCCCCGAGTCAATGTTGCATGATTTTTGGCGCTAGACTCCTTGAAA
TATCTATATTCATCTAATCAAATCTCATCCACATTTAAGGATTTGTTTTTACGAGCATCTGAATC
TTGTTTCGATTTAATTAGAAATTAATTCAGAAAAAATAGGAAAAACGATATAGAAAAAG
Found at i:12603 original size:66 final size:66
Alignment explanation
Indices: 12497--12622 Score: 189
Period size: 66 Copynumber: 1.9 Consensus size: 66
12487 CTTGTTTCCA
** * * *
12497 TGATGCTTGCCCGAATCTTGGTTAATTTTCGTCTTCGTCTTTATACAAGTCAAATTGAAGCATCC
1 TGATGCTTGCCCGAATCTTGGTTAATTTTCAACATCGTCTTTATACAAATCAAATCGAAGCATCC
12562 T
66 T
* *
12563 TGATGCTTGGCCGAATCTTGGTTAATTTTCAACATCGTCTTTGTACAAATCAAATCGAAG
1 TGATGCTTGCCCGAATCTTGGTTAATTTTCAACATCGTCTTTATACAAATCAAATCGAAG
12623 TAGTAGCAAA
Statistics
Matches: 53, Mismatches: 7, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
66 53 1.00
ACGTcount: A:0.25, C:0.20, G:0.17, T:0.37
Consensus pattern (66 bp):
TGATGCTTGCCCGAATCTTGGTTAATTTTCAACATCGTCTTTATACAAATCAAATCGAAGCATCC
T
Found at i:12983 original size:7 final size:7
Alignment explanation
Indices: 12971--13003 Score: 50
Period size: 7 Copynumber: 4.7 Consensus size: 7
12961 GTTTTCTGAC
12971 TTTTTAT
1 TTTTTAT
12978 TTTTTAT
1 TTTTTAT
12985 TTTTT-T
1 TTTTTAT
12991 TATTTTAT
1 T-TTTTAT
12999 TTTTT
1 TTTTT
13004 TCCTGCTCCT
Statistics
Matches: 24, Mismatches: 0, Indels: 4
0.86 0.00 0.14
Matches are distributed among these distances:
6 2 0.08
7 20 0.83
8 2 0.08
ACGTcount: A:0.12, C:0.00, G:0.00, T:0.88
Consensus pattern (7 bp):
TTTTTAT
Found at i:20358 original size:981 final size:971
Alignment explanation
Indices: 15320--31532 Score: 15675
Period size: 981 Copynumber: 16.6 Consensus size: 971
15310 TTAGTTGAAA
* * ** *
15320 ATCACGGTTTTTGGCTAAAAACACGTTCCGGAGCCCCGAAAAAATTTTGCATGATTTTTAGTGCA
1 ATCACGGTTTTTGGCTAAAAACGCGTTCCGGAGCCTCGAATCAATTTTGCATGATTTTTAGCGCA
* *
15385 AAGACTCCTTGAAATATCTATATTCATCGAACCAAATGTCAGCCACATTGGATATAAGGATTTGT
66 AAGACTCCTTGAAATATCTATATTCATCGAACCAAATCTTAGCCACATTGGATATAAGGATTTGT
* * *
15450 TTTTACGAGCATCTAAATCTTGTTTCGATTTAATTAGAAATTAATTC-AGAAAAAAGTTG-----
131 TTTTACGAGCATCTCAATCTTGTTTCGATTTAATTAGAAATTAATTCGA-AAAAAAATGGAAAAA
*
15509 -GA-A-TAGAAGCGTGAAAAGACCATCAATCTTTTTGGACTTGAATTATATATTTTTTCTGAGTA
195 CGATATTAGAAGCGTGAAAAGACCATCAATCTTTTTGGAGTTGAATTATATATTTTTTCTGAGTA
* * *
15571 TTGTGGCAAAAAATTTAGGAAAAAAATTTCGGGTCAGTTTTTAGCCGAAATTGTGTACTAGCCAT
260 TTGTGGCAAAAAA-TTAGGAAAAAAATTTCGGGTCAGTTTTTAGTCGAAATCGTGTACTAACCAT
* * * * *
15636 CACGGTTTTTGGGGCTAAAAACGTGTTTCGGGGGCCCCGGCTCAGTTTTACATGATTTTTGGCAG
324 CACGG-TTTT-GGGCTAAAAACGCGTTTCGGGGGCCCCGGCTAAATTTTGCATGATTTTTAGCAG
* * * *
15701 AAAAACTCCTTGAAATATCTACATTCATCAAACCAAATCCCAGCCACATTCGATTTAACGATTAG
387 AAAGACTCCTTGAAATATCTACATTCATCAAACGAAATCCCAGCCACATTGGATATAACGATTAG
15766 TTTTTACAAGCATCCAAATCTTGTTTCGATTTAATTAGAAATTAATTCAGAAAAAAATTGGAAAA
452 TTTTTACAAGCATCCAAATCTTGTTTCGATTTAATTAGAAATTAATTCAGAAAAAAATTGGAAAA
* *
15831 ACGATATTAGAAGTTTGAAAAACCCTTCAAT-TTTTTTGGC-GTGAATTATATATATTTTTTCTG
517 ACGATATTAGAAGTGTGAAAAACCCTTCAATCTTTTTT-GCATTGAATTATATATA-TTTTTCTG
* * * * *
15894 GGTATTGTGGTAAAGAATTGAGAAAAAAAATTTCGGATCTGTTTGTGCAACATTTTATTCGAAAT
580 AGTATTGTGGCAAAGAATTGAGAAAAAAAATTT---TTC-G-GTGT-CAA-ATTTTAGTCGAAAT
* * * * *
15959 CATTTACTCATCATGGTTTATGGCTAAAAACGCGTTCCGGGGCCTCC-ACTAAATTTTGCAAGAT
638 CGTGTACTCATCACGGTTTATGGCTAAAAACGCGTTCCGGGGCC-CCGGCTCAATTTTGCAAGAT
* * *
16023 TTTTAGCTTATAAG-CTCCTTCAAATATCTATATTTATCGAACAGAAATCTCAGCCATATTGGAT
702 TTTTAGC-TAAAAGACTCCTTGAAATATCTATATTTATCGAAC-GAAATCTCAGCCATATTAGAT
* *
16087 ATAAGGATTTGTCTTTT-CGAGCATCTTATTCTTGTTTCAATATAATTAGAAATTATTTCGGAAT
765 ATAAGGATTTGTCTTTTACGAGCATCTCAATCTTGTTTCAATATAATTAGAAATTATTTCGGAAT
* * *
16151 AAAATTGGAAAAACGATATTAGAAACGTGAAAAACCCCGTCAATCTTTCTGACATTGAATTGTAT
830 AAAAATGGAAAAACGATATTAGAAACGTGAAAAA-CCCGTTAATCTTTCTGGCATTGAATTGTAT
*
16216 AATTTTTCTGAGTATTGTGGCAAAAAATTAAG-AAAAACTTTTCGGGTCAGTTTTTAGTCGAAAA
894 AATTTTTCTGAGTATTGTGGCAAAAAATTAAGAAAAAACTTTTCGTGTCAGTTTTTAGTCGAAAA
16280 TCGTGTACTAACCC
959 TCGTGTACTAA-CC
* * * *
16294 ATCACGGTTTTTGGCTAAAAACGCCTTCCGGAGCCCCGAATAAATTTTGCATGATTTTTAGTGCA
1 ATCACGGTTTTTGGCTAAAAACGCGTTCCGGAGCCTCGAATCAATTTTGCATGATTTTTAGCGCA
* * * *
16359 AAGACTCCTTGAAATATTTATATTCATCGAACCAAATGTCAGCCACATTGGATATAAAGATTTGT
66 AAGACTCCTTGAAATATCTATATTCATCGAACCAAATCTTAGCCACATTGGATATAAGGATTTGT
* * *
16424 TTTTACGAGCATCTGAATCTTGTTTCGATTTAATTAGAAATTAAATCAAAAAAAAAAAAATTGGA
131 TTTTACGAGCATCTCAATCTTGTTTCGATTTAATTAGAAATTAATTC----GAAAAAAAA-TGGA
*
16489 AAAACGATATTAGAAGCGTGAAAAGACCATCAATATTTTTGGAGTTGAATTATATATTTTTTCTG
191 AAAACGATATTAGAAGCGTGAAAAGACCATCAATCTTTTTGGAGTTGAATTATATATTTTTTCTG
* *
16554 AGTATTGTGGCAAAAAATTCAGGAAAAAAATTTCGGGTCAGTTTTTAGCCGAAATCGTGTATTAA
256 AGTATTGTGGCAAAAAATT-AGGAAAAAAATTTCGGGTCAGTTTTTAGTCGAAATCGTGTACTAA
* * * * * *
16619 CCATCATGGTTTTTTTGGGCCAAAAACGTGTTTCGGGGGCCTCGGCTCAGTTTTGCATGATTTTT
320 CCATCACGG---TTTTGGGCTAAAAACGCGTTTCGGGGGCCCCGGCTAAATTTTGCATGATTTTT
* * * * * *
16684 GGCAGAAATACTCCTTGAAATATCTACATTCATCAAACCAAATCCCAACCACATTTGATTTAACG
382 AGCAGAAAGACTCCTTGAAATATCTACATTCATCAAACGAAATCCCAGCCACATTGGATATAACG
* **
16749 ATTAGTTTTTACAAGCATCAAAATCTTGTTTCGATTTAATTAGAAATTAATTTGGAAAAAAATTG
447 ATTAGTTTTTACAAGCATCCAAATCTTGTTTCGATTTAATTAGAAATTAATTCAGAAAAAAATTG
* * * * *
16814 GAAAAACGATATTAGAAGTTTCAAAAACCCTTTAATCTTTTTGGC-GTGAATTATATATATATTT
512 GAAAAACGATATTAGAAGTGTGAAAAACCCTTCAATCTTTTTTGCATTGAATTATATATAT-TTT
* * * * *
16878 TTTTAGGTATTGTGGTAAAGAATTGAGAAAAAAAAAATTTCGGATCGGTTTGTGCAAAATTTTAA
576 TCTGA-GTATTGTGGCAAAGAATTGAG--AAAAAAAATTT---TTCGG--TGT-C-AAATTTTAG
* * * *
16943 TCGAAATCGTTTACTCATCACGGTTTATGGCTAAAAACGCGTTCCGGTGCCTCGACTCAATTTTG
631 TCGAAATCGTGTACTCATCACGGTTTATGGCTAAAAACGCGTTCCGGGGCCCCGGCTCAATTTTG
*
17008 CAAGATTTTTAGCTTAAAAG-CTCCTTGAAATATCTATATTTATCGAACACAAATCTCAGCCATA
696 CAAGATTTTTAGC-TAAAAGACTCCTTGAAATATCTATATTTATCGAAC-GAAATCTCAGCCATA
* *
17072 TTGGTTATAAGGATTTGTCTTTT-CGAGCATCTCAATCTTGTTTCAATATAATTAGAAATTATTT
759 TTAGATATAAGGATTTGTCTTTTACGAGCATCTCAATCTTGTTTCAATATAATTAGAAATTATTT
17136 CGGAATAAAAATGGAAAAACGATATTAGAAACGTGAAAAAACCCGTTAATCTTTCTGGCATTGAA
824 CGGAATAAAAATGGAAAAACGATATTAGAAACGTG-AAAAACCCGTTAATCTTTCTGGCATTGAA
*
17201 TTGTATAATTTTTCTGAGTATTGTGGC-AAAAATTAAGAAAAAACTTTTCGGGTCAGTTTTTAGT
888 TTGTATAATTTTTCTGAGTATTGTGGCAAAAAATTAAGAAAAAACTTTTCGTGTCAGTTTTTAGT
17265 CGAAAATCGTGTACTAACCC
953 CGAAAATCGTGTACTAA-CC
* * *
17285 ATCACGGTTTTTGGCTAAAAACGCGTTCCGGAGCCCCGAATAAATTTTGTATGATTTTTAGCGCA
1 ATCACGGTTTTTGGCTAAAAACGCGTTCCGGAGCCTCGAATCAATTTTGCATGATTTTTAGCGCA
* * *
17350 AAGACTCCTTGAAATATCTATATTCATCGAACCAAATGTCAGCCACATTGGATATAAAGATTTGT
66 AAGACTCCTTGAAATATCTATATTCATCGAACCAAATCTTAGCCACATTGGATATAAGGATTTGT
* * *
17415 TTTTACGAGCATCTGAATCTTGTTTCGATTTAATTAGAAATTAAATCAAAAAAAAATTGGAAAAA
131 TTTTACGAGCATCTCAATCTTGTTTCGATTTAATTAGAAATTAATTCGAAAAAAAA-TGGAAAAA
*
17480 CGATATTAGAAGCGTGAAAAGACCATCAATATTTTTGGAGTTGAATTATATATTTTTTCTGAGTA
195 CGATATTAGAAGCGTGAAAAGACCATCAATCTTTTTGGAGTTGAATTATATATTTTTTCTGAGTA
** *
17545 TTGTGGCAAAAAATTCAGGAAAAAAATTTCGGGTCAGTTTTTAAACGAAATCGTTTACTAACCAT
260 TTGTGGCAAAAAATT-AGGAAAAAAATTTCGGGTCAGTTTTTAGTCGAAATCGTGTACTAACCAT
* * *
17610 CACGGTTTTGGGGCTAAAAACGTC-TTTCGGGGGCCCCGGCTCAGTTTTGCATGATTTTTGGCAG
324 CACGGTTTT-GGGCTAAAAACG-CGTTTCGGGGGCCCCGGCTAAATTTTGCATGATTTTTAGCAG
* ** * * *
17674 AAACACTCCTTGAAATATCTACATTTGTCAAACGAAATCCCAGCCACATTCGATTTATCGATTAG
387 AAAGACTCCTTGAAATATCTACATTCATCAAACGAAATCCCAGCCACATTGGATATAACGATTAG
*
17739 TTTTTACAAGCATCCAAATCTTGTTTCGATATAATTAGAAATTAATTCAGAAAAAAATTGGAAAA
452 TTTTTACAAGCATCCAAATCTTGTTTCGATTTAATTAGAAATTAATTCAGAAAAAAATTGG-AAA
* *
17804 AACGATATTAGAAGTTTGAAAAACCCTTCAATCTTTTTTGC-GTGAATTATATATATTTTTTCTG
516 AACGATATTAGAAGTGTGAAAAACCCTTCAATCTTTTTTGCATTGAATTATATATA-TTTTTCTG
* * * * * *
17868 GGTATTGCGGTAAAGAATTGAGAAAAAATATTTCGGATCGGTTTGTGCAAAATTTTAATCGAAAT
580 AGTATTGTGGCAAAGAATTGAGAAAAAAAATTT---TTCGG--TGT-C-AAATTTTAGTCGAAAT
* * * * *
17933 CGTTTACTCATCACAGTTTATGGCTAAAAACGGGTTCCGGTGCCTCGGCTCAATTTTGCAAGATT
638 CGTGTACTCATCACGGTTTATGGCTAAAAACGCGTTCCGGGGCCCCGGCTCAATTTTGCAAGATT
* * * * * * * * * *
17998 TTTAACTTAAAAG-TTCCTTCAAATATTTATGTTTATTGAACAGAAACCTTAGCTATATTAAATA
703 TTTAGC-TAAAAGACTCCTTGAAATATCTATATTTATCGAAC-GAAATCTCAGCCATATTAGATA
* *
18062 TAAGGATTTGTCTTTT-CGAGCATCTCAATCTTGTTTCAATATATTTAGAAATTATTTCAGAATA
766 TAAGGATTTGTCTTTTACGAGCATCTCAATCTTGTTTCAATATAATTAGAAATTATTTCGGAATA
*
18126 AAAATGGAAAAACGATATTAGAAACGTGAAAAAACCCGTGAATCTTTCTGGCATTGAATTGTATA
831 AAAATGGAAAAACGATATTAGAAACGTG-AAAAACCCGTTAATCTTTCTGGCATTGAATTGTATA
*
18191 ATTTTTCTGAATATTGTGGCAAAAAATTAAGAAAAAACTTTTCG-GTCAGTTTTTAGTCGAAAAT
895 ATTTTTCTGAGTATTGTGGCAAAAAATTAAGAAAAAACTTTTCGTGTCAGTTTTTAGTCGAAAAT
18255 CGTGTACTAACC
960 CGTGTACTAACC
* * * *
18267 ATTACGGTTTTTGGCTAAAAACGCGTTTCGGAGCCCCGAATAAATTTTGCATGATTTTTAGCGCA
1 ATCACGGTTTTTGGCTAAAAACGCGTTCCGGAGCCTCGAATCAATTTTGCATGATTTTTAGCGCA
* *
18332 AAGACTCCTTGAAATATCTATATTCATCGAATCAAATGTTAGCCACATTGGATATAAGGATTT-T
66 AAGACTCCTTGAAATATCTATATTCATCGAACCAAATCTTAGCCACATTGGATATAAGGATTTGT
* *
18396 TTTTACGGGCATCTGAATCTTGTTTCGATTTAATTAGAAATTAATTC-AGAAAAAAATGGAAAAA
131 TTTTACGAGCATCTCAATCTTGTTTCGATTTAATTAGAAATTAATTCGA-AAAAAAATGGAAAAA
* * *
18460 TGATATTAGATGCGTGAAAAGACAATCAATCTTTTTGGAGTTGAATTATATATTTTTTCTGAGTA
195 CGATATTAGAAGCGTGAAAAGACCATCAATCTTTTTGGAGTTGAATTATATATTTTTTCTGAGTA
** *
18525 GAGTGGCAAAAAATTAAGGAAAAAAATTTCGGGTCAGTTTTTAGACGAAATCGTGTACTAACCAT
260 TTGTGGCAAAAAATT-AGGAAAAAAATTTCGGGTCAGTTTTTAGTCGAAATCGTGTACTAACCAT
* * * * *
18590 CACGGTTTTGGGGCTAAAAACGTGTTTCGGGGGCCCCAGCTCAGTTTTGCATGATTTTTGGCAGA
324 CACGGTTTT-GGGCTAAAAACGCGTTTCGGGGGCCCCGGCTAAATTTTGCATGATTTTTAGCAGA
** * * * *
18655 AAGACTCCTTGAAATATCTACATTTGTCAAACGAAATCCCAACCACATTCGATTTATCGATTAGT
388 AAGACTCCTTGAAATATCTACATTCATCAAACGAAATCCCAGCCACATTGGATATAACGATTAGT
* *
18720 TTTTACAAGCATCCAAATCTTGTTTCGATTTAATTAGAAATTAATTC-GGAAAAAATTGAAAAAA
453 TTTTACAAGCATCCAAATCTTGTTTCGATTTAATTAGAAATTAATTCAGAAAAAAATTG-GAAAA
* *
18784 ACGATATTAGAAGTTTGAAAAACCCTTCAATC-TTTTTGC-GTGAATTATATATATTTTTTCT-A
517 ACGATATTAGAAGTGTGAAAAACCCTTCAATCTTTTTTGCATTGAATTATATATA-TTTTTCTGA
* * * *
18846 GGTATTGTGGAAAAGAATTGAGAAAAAATATTTCGGATCGGTTTGTGCAAAATTTTAATCGAAAT
581 -GTATTGTGGCAAAGAATTGAGAAAAAAAATTT---TTCGG--TGT-C-AAATTTTAGTCGAAAT
* * * * * * *
18911 CGTTTACTCATCACAGTTTATGGCT-AAAATGCGTTCCGGTGCCTCGACACAATTTTGCAAGATT
638 CGTGTACTCATCACGGTTTATGGCTAAAAACGCGTTCCGGGGCCCCGGCTCAATTTTGCAAGATT
* * * * * * * *
18975 TTTAACTTAAAAG-TTCCTTCAAATATTTATGTTTATCGAACAGAAATCTTAGCCATTTTAAATA
703 TTTAGC-TAAAAGACTCCTTGAAATATCTATATTTATCGAAC-GAAATCTCAGCCATATTAGATA
*
19039 TAAGGATTTGTCTTTT-CGAGCATCTCAATCTTGTTTCAATAT-ATATAGAAATTATTTCAGAAT
766 TAAGGATTTGTCTTTTACGAGCATCTCAATCTTGTTTCAATATAAT-TAGAAATTATTTCGGAAT
* * *
19102 AAAAATGGAAAAACGATATTAGAAATGTGAAAAAACCCGTGAATCTTTCTGACATTGAATTGTAT
830 AAAAATGGAAAAACGATATTAGAAACGTG-AAAAACCCGTTAATCTTTCTGGCATTGAATTGTAT
* *
19167 AATTTTTCTGAATATTGTGGCAAAAAATTAAGAAAAAACTTTTCGGGTCAGTTTTTAGTCGAAAA
894 AATTTTTCTGAGTATTGTGGCAAAAAATTAAGAAAAAACTTTTCGTGTCAGTTTTTAGTCG-AAA
19232 ATCGTGTACTAACC
958 ATCGTGTACTAACC
* *
19246 ATCACGGTTTTTGGCTAAAAACGCGTTTCGGAGCCTCGAATAAATTTTGCATGATTTTTAGCGCA
1 ATCACGGTTTTTGGCTAAAAACGCGTTCCGGAGCCTCGAATCAATTTTGCATGATTTTTAGCGCA
*
19311 AAGACTCCTTGAAATATCTATATTCATCGAACCAAATGTTAGCCACATTGGATATAAGGATTT-T
66 AAGACTCCTTGAAATATCTATATTCATCGAACCAAATCTTAGCCACATTGGATATAAGGATTTGT
* * *
19375 TTTTTCGGGCATCTGAATCTTGTTTCGATTTAATTAGAAATTAATTC-AAAAAAAATGGAAAAAC
131 TTTTACGAGCATCTCAATCTTGTTTCGATTTAATTAGAAATTAATTCGAAAAAAAATGGAAAAAC
19439 GATATTAGAAGCGTGAAAAGACCATCAATCTTTTTGGAGTTGAATTATATATTTTTTCTGAGTAG
196 GATATTAGAAGCGTGAAAAGACCATCAATCTTTTTGGAGTTGAATTATATATTTTTTCTGAGT--
* *
19504 ATTG-GG-AAAAAATTCAGGAAAAAAAATTTCTGGTCAGTTTTTAGCCGAAATCGTGTACTAACC
259 ATTGTGGCAAAAAATT-AGG-AAAAAAATTTCGGGTCAGTTTTTAGTCGAAATCGTGTACTAACC
* * * * *
19567 ATCACAGTTTTGGGGCTAAAAACGTGTTTCGGGGGCCCCGGCTCAGTTTTGCATGATTTTTGGCA
322 ATCACGGTTTT-GGGCTAAAAACGCGTTTCGGGGGCCCCGGCTAAATTTTGCATGATTTTTAGCA
** * * *
19632 GAAAGACTCCTTGAAATATCTACATTTGTCAAACGAAATCCCAGCCACATTCGATTTATCGATTA
386 GAAAGACTCCTTGAAATATCTACATTCATCAAACGAAATCCCAGCCACATTGGATATAACGATTA
*
19697 GTTTTTACAAGCATCCAAATCTTGTTTCGATTTAATTAGAAATTAATTCGGAATAAAAATTGGAA
451 GTTTTTACAAGCATCCAAATCTTGTTTCGATTTAATTAGAAATTAATTCAGAA-AAAAATTGGAA
* *
19762 AAACAATATTAGAAGTTTGAAAAACCCTTCAATCTTTTTTGCA-TGAATTATATATATTTTTCTG
515 AAACGATATTAGAAGTGTGAAAAACCCTTCAATCTTTTTTGCATTGAATTATATATATTTTTCTG
* * * *
19826 GGTATTGTGGTAAAGAATTGAGAAAAAAAATTTCTGATCGGTTTGTGCAAAATTTTAATCGAAGT
580 AGTATTGTGGCAAAGAATTGAGAAAAAAAATTT-T--TCGG--TGT-C-AAATTTTAGTCGAAAT
* * * *
19891 CGTTTACTCATCACGGTTTATGGCTAAAAACGCGTTCCGGTGCCTCGGTTCAATTTTGCAAGATT
638 CGTGTACTCATCACGGTTTATGGCTAAAAACGCGTTCCGGGGCCCCGGCTCAATTTTGCAAGATT
* * * * * *
19956 TTTAGCTTAAAAG-CTCCTTCAAATATTTATGTTTATCAAACAGAAATCTTAGCCATATTAAATA
703 TTTAGC-TAAAAGACTCCTTGAAATATCTATATTTATCGAAC-GAAATCTCAGCCATATTAGATA
20020 TAAGGATTTGTCTTTT-CGAGCATCTCAATCTTGTTTCAATATAATTAGAAATTATTTCGGAATA
766 TAAGGATTTGTCTTTTACGAGCATCTCAATCTTGTTTCAATATAATTAGAAATTATTTCGGAATA
*
20084 AAAATGGGAAAACGATATTAGAAACGTGAGAAAACCCGTTAATCTTTCTGGCATTGAATTGTATA
831 AAAATGGAAAAACGATATTAGAAACGTGA-AAAACCCGTTAATCTTTCTGGCATTGAATTGTATA
*
20149 ATTTTTCTGAGTATTGTGGCAAAAATTTAAGAAAAAACTTTTCGTGTCAGTTTTTAGTCGAAAAT
895 ATTTTTCTGAGTATTGTGGCAAAAAATTAAGAAAAAACTTTTCGTGTCAGTTTTTAGTCGAAAAT
*
20214 CATGTACTAACC
960 CGTGTACTAACC
* * *
20226 ATCACGGTTTTTGGCTAAAAACGCGTTCCGGAGCCCCGAATAAATTTTGCATGATTCTTAGCGCA
1 ATCACGGTTTTTGGCTAAAAACGCGTTCCGGAGCCTCGAATCAATTTTGCATGATTTTTAGCGCA
**
20291 AAGACTCCTTGAAATATCTATATTCATCGAACCAAAAGTTAGCCACATTGGATATAAGGATTT-T
66 AAGACTCCTTGAAATATCTATATTCATCGAACCAAATCTTAGCCACATTGGATATAAGGATTTGT
* * *
20355 TTTTACGGGCATCTGAATCTTGTTTCGATTTAATTAGAAATTAATTCAGAAAAAAAATGGAAAAG
131 TTTTACGAGCATCTCAATCTTGTTTCGATTTAATTAGAAATTAATTC-GAAAAAAAATGGAAAAA
20420 CGATATTAGAAGCGTGAAAAGACCATCAATCTTTTTGGAGTTGAATTATATATTTTTTCTGAGTA
195 CGATATTAGAAGCGTGAAAAGACCATCAATCTTTTTGGAGTTGAATTATATATTTTTTCTGAGTA
** * *
20485 GAGTGGCAAAAAATTCAGGACAAAAATTTCGGGTCAGTTTTTAGCCGAAATCGTGTACTAACCAT
260 TTGTGGCAAAAAATT-AGGAAAAAAATTTCGGGTCAGTTTTTAGTCGAAATCGTGTACTAACCAT
* * *
20550 CACGGTTTTGGGGCTAAAAACGTGTTTCGGGGGCCCCGGCTAAGTTTTGCATGATTTTTGGCAGA
324 CACGGTTTT-GGGCTAAAAACGCGTTTCGGGGGCCCCGGCTAAATTTTGCATGATTTTTAGCAGA
** * * *
20615 AAGACTCCTTGAAATATCTACATTTTTCAAACGAAATCCCAGCCACATTCGATTTATCGATTAGT
388 AAGACTCCTTGAAATATCTACATTCATCAAACGAAATCCCAGCCACATTGGATATAACGATTAGT
* *
20680 TTTTACAGGCATCCAAATCTTGTTTCGATTTAATTAGAAATTAATTCGGAGAAAAAATTGGAAAA
453 TTTTACAAGCATCCAAATCTTGTTTCGATTTAATTAGAAATTAATTCAGA-AAAAAATTGGAAAA
* * *
20745 ACGATATTAGAAGTTTGAAAAACCCTTCAATCTTTTTTGC-GTGAATTATATATATTTTTTCTGG
517 ACGATATTAGAAGTGTGAAAAACCCTTCAATCTTTTTTGCATTGAATTATATATA-TTTTTCTGA
* * * *
20809 GTATTGTGGTAAAGAATCGAGAAAAAAAATTTCGGATCGGTTTGTTCAAAATTTTAATCGAAATC
581 GTATTGTGGCAAAGAATTGAGAAAAAAAATTT---TTCGG--TG-TC-AAATTTTAGTCGAAATC
* * * *
20874 GTTTACTCATCACGGTTTATGGCTAAAAACGCGTTCCGGTGCCTCGGTTCAATTTTGCAAGATTT
639 GTGTACTCATCACGGTTTATGGCTAAAAACGCGTTCCGGGGCCCCGGCTCAATTTTGCAAGATTT
* * * * *
20939 TTAGCTTAAAAG-CTCCTTCAAATATTTATGTTTATCGAACAGAAATCTTAGCCATATTAAATAT
704 TTAGC-TAAAAGACTCCTTGAAATATCTATATTTATCGAAC-GAAATCTCAGCCATATTAGATAT
21003 AAGGATTTGTCTTTT-CGAGCATCTCAATCTTGTTTCAATATAATTAGAAATTATTTCGGAATAA
767 AAGGATTTGTCTTTTACGAGCATCTCAATCTTGTTTCAATATAATTAGAAATTATTTCGGAATAA
21067 AAATGGAAAAACGATATTAGAAACGTGAGAAAACCCGTTAATCTTTCTGGCATTGAATTGTATAA
832 AAATGGAAAAACGATATTAGAAACGTGA-AAAACCCGTTAATCTTTCTGGCATTGAATTGTATAA
*
21132 TTTTTATGAGTATTGTGGCAAAAAATTAAGAAAAAACTTTTCGTGTCAGTTTTTAGTCGAAAATC
896 TTTTTCTGAGTATTGTGGCAAAAAATTAAGAAAAAACTTTTCGTGTCAGTTTTTAGTCGAAAATC
21197 GTGTACTAACC
961 GTGTACTAACC
* *
21208 ATCACGGTTTTTGGCTAAAAACGCGTTCCGGAGCCCCGAATAAATTTTGCATGATTTTTAGCGCA
1 ATCACGGTTTTTGGCTAAAAACGCGTTCCGGAGCCTCGAATCAATTTTGCATGATTTTTAGCGCA
*
21273 AAGACTCCTTGAAATATCTATATTCATCGAACCAAATGTTAGCCACATTGGATATAAGGATTT-T
66 AAGACTCCTTGAAATATCTATATTCATCGAACCAAATCTTAGCCACATTGGATATAAGGATTTGT
* * *
21337 TTTTACGGGCATCTGAATCTTGTTTCGATTTAATTAGAAATTAATTC-AGAAAAAAATGGAAAAG
131 TTTTACGAGCATCTCAATCTTGTTTCGATTTAATTAGAAATTAATTCGA-AAAAAAATGGAAAAA
21401 CGATATTAGAAGCGTGAAAAGACCATCAATCTTTTTGGAGTTGAATTATATATTTTTTCTGAGTA
195 CGATATTAGAAGCGTGAAAAGACCATCAATCTTTTTGGAGTTGAATTATATATTTTTTCTGAGTA
** * * *
21466 GAGTGGCAAAAAATTCAGGACAAAAATTTCGGGTCAGTTTTTAGCCGAAATCCTGTACTAACCAT
260 TTGTGGCAAAAAATT-AGGAAAAAAATTTCGGGTCAGTTTTTAGTCGAAATCGTGTACTAACCAT
* * *
21531 CACGGTTTTTGGGCTAAAAACGTGTTTCGGGGGCCCCGGCTAAGTTTTGCATGATTTTTGGCAGA
324 CACGG-TTTTGGGCTAAAAACGCGTTTCGGGGGCCCCGGCTAAATTTTGCATGATTTTTAGCAGA
* ** * * * *
21596 AAGACTCCTTGGAATATCTACATTTGTTAAACGAAATCCCAGCCACATTCGATTTATCGATTAGT
388 AAGACTCCTTGAAATATCTACATTCATCAAACGAAATCCCAGCCACATTGGATATAACGATTAGT
* * *
21661 TTTTACAGGCATCCAAATCTTGTTCCGATTTAATTAGAAATTAATTCGGAGAAAAAATTGGAAAA
453 TTTTACAAGCATCCAAATCTTGTTTCGATTTAATTAGAAATTAATTCAGA-AAAAAATTGGAAAA
* * * *
21726 ACGATATTAGAAGTTTGAAAAACCCCTCAATCTTTTTTGC-GTGAATTATATATATTTTTTCTGG
517 ACGATATTAGAAGTGTGAAAAACCCTTCAATCTTTTTTGCATTGAATTATATATA-TTTTTCTGA
* * * * *
21790 GTATTGTGGTAAAGAATCGAGAAAAAAAATTTAGGATCGGTTTGTGCAAAATTTAAATCGAAATC
581 GTATTGTGGCAAAGAATTGAGAAAAAAAATTT---TTCGG--TGT-C-AAATTTTAGTCGAAATC
* * * *
21855 GTTTACTCATCACGGTTTATGGCTAAAAACGCGTTCCGGTGCCTCGGTTCAATTTTGCAAGATTT
639 GTGTACTCATCACGGTTTATGGCTAAAAACGCGTTCCGGGGCCCCGGCTCAATTTTGCAAGATTT
* * * *
21920 TTAGCTTAAAAG-CTCCTTGAAATATTTATCTTTATCGAACAGAAATCTTAGCCATATTAAATAT
704 TTAGC-TAAAAGACTCCTTGAAATATCTATATTTATCGAAC-GAAATCTCAGCCATATTAGATAT
21984 AAGGATTTGTCTTTT-CGAGCATCTCAATCTTGTTTCAATATAATTAGAAATTATTTCGGAATAA
767 AAGGATTTGTCTTTTACGAGCATCTCAATCTTGTTTCAATATAATTAGAAATTATTTCGGAATAA
22048 AAATGGAAAAACGATATTAGAAACGTGAGAAAACCCGTTAATCTTTCTGGCATTGAATTGTATAA
832 AAATGGAAAAACGATATTAGAAACGTGA-AAAACCCGTTAATCTTTCTGGCATTGAATTGTATAA
22113 TTTTTCTGAGTATTGTGGCAAAAAATTAAGAAAAAACTTTTCGTGTCAGTTTTTAGTCGAAAATC
896 TTTTTCTGAGTATTGTGGCAAAAAATTAAGAAAAAACTTTTCGTGTCAGTTTTTAGTCGAAAATC
*
22178 GTTTACTAACC
961 GTGTACTAACC
* * * *
22189 ATCACGGTTTTTGGCTAAAAACGCATTCCGGAGCCCCGAATAAATTTTGCATGATTTTTAGCGAA
1 ATCACGGTTTTTGGCTAAAAACGCGTTCCGGAGCCTCGAATCAATTTTGCATGATTTTTAGCGCA
* * *
22254 AAGAATTCTTGAAATATCTATATTCATCGAACCAAATGTTAGCCACATTGGATATAAGGATTT-T
66 AAGACTCCTTGAAATATCTATATTCATCGAACCAAATCTTAGCCACATTGGATATAAGGATTTGT
* * *
22318 TTTTACGGGCATCTGAATCTTGTTTCGATTTAATTAGAAATTAATTC-AGAAAAAAATGGAAAAG
131 TTTTACGAGCATCTCAATCTTGTTTCGATTTAATTAGAAATTAATTCGA-AAAAAAATGGAAAAA
22382 CGATATTAGAAGCGTGAAAAGACCATCAATCTTTTTGGAGTTGAATTATATATTTTTTCTGAGTA
195 CGATATTAGAAGCGTGAAAAGACCATCAATCTTTTTGGAGTTGAATTATATATTTTTTCTGAGTA
** * * *
22447 GAGTGGTAAAAAATTCAGGACAAAAATTTCGGGTCAGTTTTTAGCCGAAATCGTGTACTAACCAT
260 TTGTGGCAAAAAATT-AGGAAAAAAATTTCGGGTCAGTTTTTAGTCGAAATCGTGTACTAACCAT
* * * *
22512 CACGGTTTTGGGGCTAAAAACGTGTTTCGGGGGCCCCGGCTCAGTTTTGCATGATTTTTGGCAGA
324 CACGGTTTT-GGGCTAAAAACGCGTTTCGGGGGCCCCGGCTAAATTTTGCATGATTTTTAGCAGA
** * * *
22577 AAGACTCCTTGAAATATCTACATTTGTCAAACGAAATCCCAGCCACATTCGATTTATCGATTAGT
388 AAGACTCCTTGAAATATCTACATTCATCAAACGAAATCCCAGCCACATTGGATATAACGATTAGT
* *
22642 TTTTACAGGCATCCAAATCTTGTTTCGATTTAATTAG-AATCTAATTCGGAAAAAAATTTGGAAA
453 TTTTACAAGCATCCAAATCTTGTTTCGATTTAATTAGAAAT-TAATTCAGAAAAAAA-TTGGAAA
* * * * *
22706 AACGATATTAGAAACGTGAGAAAAACGCGTT-AATCTTTCTGGCATTGAATTGTATA-ATTTTTC
516 AACGATATTAG-AA-GTGTGAAAAAC-CCTTCAATCTTTTTTGCATTGAATTATATATATTTTTC
** * **
22769 TGAGTATTGTGGCAAAGAATCAAG-AAAAAACTTTTTC-GTGTCAGTTTTTAGTCGAAAATCGTG
578 TGAGTATTGTGGCAAAGAATTGAGAAAAAAAATTTTTCGGTGTCAAATTTTAGTCG-AAATCGTG
* * *
22832 TACTAACCATCACGGTTTATGGCTAAAAACGCGTTCCGGTGCCTCGGTTCAATTTTGCAAGATTT
642 TACT---CATCACGGTTTATGGCTAAAAACGCGTTCCGGGGCCCCGGCTCAATTTTGCAAGATTT
* * * * *
22897 TTAGCTTAAAAG-CTCATTCAAATAT-TATGTTTATCGAACAGAAATCTTAGCCATATTAAATAT
704 TTAGC-TAAAAGACTCCTTGAAATATCTATATTTATCGAAC-GAAATCTCAGCCATATTAGATAT
*
22960 AAGGATTTGTCTTTT-CGAGCATCTCAATCTTGTTTCAATATAATTAGAAATTATTTCAGAATAA
767 AAGGATTTGTCTTTTACGAGCATCTCAATCTTGTTTCAATATAATTAGAAATTATTTCGGAATAA
* *
23024 AAATGGAAAAACGATATTAGAAACGTGAAAAAAACCCGTTAATCTTTCGTGGCATTGCATTGCAT
832 AAATGGAAAAACGATATTAGAAACGTG--AAAAACCCGTTAATCTTTC-TGGCATTGAATTGTAT
*
23089 AATTTTTATGAGTATTGTGGCAAAAAAATTAAGAAAAAACTTTTCGTGTCAGTTTTTAGTCGAAA
894 AATTTTTCTGAGTATTGTGGC-AAAAAATTAAGAAAAAACTTTTCGTGTCAGTTTTTAGTCGAAA
23154 ATCGTGTACTAACC
958 ATCGTGTACTAACC
* * ** * **
23168 ATCACGGTTTATGGCTAAAAACGCGTTCCGGTGCCTCGGTTCAATTTTGCAAGATTTTTAGCTTA
1 ATCACGGTTTTTGGCTAAAAACGCGTTCCGGAGCCTCGAATCAATTTTGCATGATTTTTAGCGCA
* * * * ** * **
23233 AA-AGCTCATTCAAATAT-TATGTTTATCGAATAGAAATCTTAGCCATATTAAATATAAGGATTT
66 AAGA-CTCCTTGAAATATCTATATTCATCGAA-CCAAATCTTAGCCACATTGGATATAAGGATTT
* * * * *
23296 GTCTTTT-CGAGCATCTCAATCTTGTTTCAATATAATTAGAAATTATTTCAGAATAATAATGGAA
129 GT-TTTTACGAGCATCTCAATCTTGTTTCGATTTAATTAGAAATTAATTC-GAAAAAAAATGGAA
* * * * * * * *
23360 AAACGATATTAGAAACGTGAAAA-ACCCGTTAATCTTTCTGGCA-TTGCATTGTATAATTTTTAT
192 AAACGATATTAGAAGCGTGAAAAGA-CCATCAATCTTTTTGG-AGTTGAATTATATATTTTTTCT
* * *
23423 GAGTATTGTGGCAAAAAATTAAGAAAAAACTTTTCGTGTCAGTTTTTAGTCGAAAATCGTGTACT
255 GAGTATTGTGGCAAAAAATTAGGAAAAAA-ATTTCGGGTCAGTTTTTAGTCG-AAATCGTGTACT
* * * **
23488 AACCATCACGGGTTTT-GGCTAAAAACGCG-TTCCGGAGCCTCGAATAAATTTTGCATGATTTTT
318 AACCATCAC-GGTTTTGGGCTAAAAACGCGTTTCGGGGGCCCCGGCTAAATTTTGCATGATTTTT
* * * *** *
23551 AGC-GCAAAGACTCCTTGAAATATCTATATTCATCGAACCAAATGTTAGCCACATTGGATATAAG
382 AGCAG-AAAGACTCCTTGAAATATCTACATTCATCAAACGAAATCCCAGCCACATTGGATATAAC
* * ** ** * *
23615 GATT-TTTTTTTCGGGCATCTGAATCTTGTTTCGATTTAATTAGAAATTAATTAAGAAAAAAAAT
446 GATTAGTTTTTACAAGCATCCAAATCTTGTTTCGATTTAATTAGAAATTAATTCAGAAAAAAATT
* * * * * *
23679 GGAAAAGCGATATTTGAAGCGTGAAAAGA-CCATCAATC-TTTTTGGAGTTGAAAT-TATATA-T
511 GGAAAAACGATATTAGAAGTGTGAAAA-ACCCTTCAATCTTTTTTGCA-TTGAATTATATATATT
** * ** ** *
23740 TTTCTTGAGTAGAGTGGCGAAA-AATTCATG--GCAAAA--TTTCGG-GTCAGTTTTTAGCCGAA
574 TTTC-TGAGTATTGTGGC-AAAGAATTGA-GAAAAAAAATTTTTCGGTGTCAAATTTTAGTCGAA
* * * * * *
23799 ATCCTGTACTAACCATCACGGTTTTTGGGCTAAAACCGTGTTTCGGGGGCCCCGGCTCAGTTTTG
636 ATCGTGTACT---CATCACGGTTTAT-GGCTAAAAACGCG-TTCCGGGGCCCCGGCTCAATTTTG
* * * * * * * *
23864 CATGATTTTTCGC-AGAAAGACTCCTTGAAACATCTACATTTGTCAAACGAAATCCCAGCCACAT
696 CAAGATTTTTAGCTA-AAAGACTCCTTGAAATATCTATATTTATCGAACGAAATCTCAGCCATAT
* * ** * * * * *
23928 TCGATTTATCGATTAGT-TTTTACAAGCATC-CAAATCTTGTTTCGATTTAATTAGAAATTAATT
760 TAGATATAAGGATTTGTCTTTTACGAGCATCTC-AATCTTGTTTCAATATAATTAGAAATTATTT
* * *
23991 CGGAA-AAAATTTGGAAAAATGATATTAGAAACGTGAGAAAACGCGTTAATCTTTCTGGCATTGA
824 CGGAATAAAA-ATGGAAAAACGATATTAGAAACGTGA-AAAACCCGTTAATCTTTCTGGCATTGA
24055 ATTGTATAATTTTTCTGAGTATTGTGGCAAAAAATTAAGAAAAAACTTTTCGTGTCAGTTTTTAG
887 ATTGTATAATTTTTCTGAGTATTGTGGCAAAAAATTAAGAAAAAACTTTTCGTGTCAGTTTTTAG
24120 TCGAAAATCGTGTACTAACC
952 TCGAAAATCGTGTACTAACC
* * ** * **
24140 ATCACGGTTTATGGCTAAAAACGCGTTCCGGTGCCTCGGTTCAATTTTGCAAGATTTTTAGCTTA
1 ATCACGGTTTTTGGCTAAAAACGCGTTCCGGAGCCTCGAATCAATTTTGCATGATTTTTAGCGCA
* * * * * * **
24205 AA-AGCTCATTCAAATAT-TATGTTTATCGAACAGAAATCTTAGCCATATTAAATATAAGGATTT
66 AAGA-CTCCTTGAAATATCTATATTCATCGAAC-CAAATCTTAGCCACATTGGATATAAGGATTT
* * * * * *
24268 GTCTTTT-CTAGCTTCTCAATCTTGTTTCAATATAATTAGAAATTATTTCAGAATAAAAATGGAA
129 GT-TTTTACGAGCATCTCAATCTTGTTTCGATTTAATTAGAAATTAATTC-GAAAAAAAATGGAA
* * * * * * * *
24332 AAACGATATTAGAAACGTGAAAAAACCCGTTAATCTTTCTGGCA-TTGAATTGTATAATTTTTAT
192 AAACGATATTAGAAGCGTGAAAAGA-CCATCAATCTTTTTGG-AGTTGAATTATATATTTTTTCT
* * * *
24396 GAGTATTGTCGCAAAAAATTAAGAAAAAACTTTTCGTGTCAGTTTTTAGTCGAAAATCGTGTACT
255 GAGTATTGTGGCAAAAAATTAGGAAAAAA-ATTTCGGGTCAGTTTTTAGTCG-AAATCGTGTACT
* * **
24461 AACCATCACGGGTTTT-GGATAAAAACGCGTTTC-GGAGCCCCGAATAAATTTTGCATGATTTTT
318 AACCATCAC-GGTTTTGGGCTAAAAACGCGTTTCGGGGGCCCCGGCTAAATTTTGCATGATTTTT
* * * * *** * * *
24524 AGC-GCAAAGAATCCTTGAAATATCTATATTCATCGAACCAAATTTTACCCACATTGGATAGAAG
382 AGCAG-AAAGACTCCTTGAAATATCTACATTCATCAAACGAAATCCCAGCCACATTGGATATAAC
** ** *
24588 GATT--TTTTTACGGGCATCTGAATCTTGTTTCGATTTAATTAGAAATTAATTCAGAAAAAAAAT
446 GATTAGTTTTTACAAGCATCCAAATCTTGTTTCGATTTAATTAGAAATTAATTCAGAAAAAAATT
* * * * *
24651 AGAAAAGCGATATTAGAAGCGTGAAAAGA-CCATCAATC-TTTTTGGAGTTGAATTATATAT-TT
511 GGAAAAACGATATTAGAAGTGTGAAAA-ACCCTTCAATCTTTTTTGCA-TTGAATTATATATATT
** * * * * * * *
24713 TTTCTGAGTAGAGTGGTAAAAAATTCAGGACAAAAA--TTTCGG-GTC-ATTTTTAGCCGAAATC
574 TTTCTGAGTATTGTGGCAAAGAATTGAGAAAAAAAATTTTTCGGTGTCAAATTTTAGTCGAAATC
* * *
24774 GTGTACTTACTATCACGGTTT-TGGGGCTAAAAACGTGTTTCGGGGGCCCCGGCTCAGTTTTGCA
639 GTGTAC-T-C-ATCACGGTTTAT--GGCTAAAAACGCG-TTCCGGGGCCCCGGCTCAATTTTGCA
* * * * * * * *
24838 TGATTTTTGGC-AGAAAGACTCCTTGAAATATCTACATTTGTCAAACGAAATCCCAGCCACATTC
698 AGATTTTTAGCTA-AAAGACTCCTTGAAATATCTATATTTATCGAACGAAATCTCAGCCATATTA
* ** * * * *
24902 GATTTATCGATTAGT-TTTTAC-AGGCATC-CAAATCTTGTTTCGATTTAATTAG-AATCTAATT
762 GATATAAGGATTTGTCTTTTACGA-GCATCTC-AATCTTGTTTCAATATAATTAGAAAT-TATTT
* * *** * * * *
24963 CGGAAAAAAAATTTGAAAAACGATATTAGAAGTTTGAAAGACCC-TTCAATATTTTTTGCA-TGA
824 CGGAATAAAAA-TGGAAAAACGATATTAGAAACGTGAAAAACCCGTT-AATCTTTCTGGCATTGA
* * * * ** *
25026 ATTATATATATTTTTTCTGGGTATTGTGGTAAAGAATCGAGAAAAAAAATTTCGGATCTGTTTGT
887 ATTGTATA-A-TTTTTCTGAGTATTGTGGCAAAAAATTAAG-AAAAAACTTT----TC-G--TGT
** * *
25091 GCAAAATTTTAATCG-AAATCGTTTACT---C
942 -C-AGTTTTTAGTCGAAAATCGTGTACTAACC
* * * ** * **
25119 ATCACAGTTTATGGCTAAAAACGCGTTCCGGTGCCTCGGTTCAATTTTGCAAGATTTTTAGCTTA
1 ATCACGGTTTTTGGCTAAAAACGCGTTCCGGAGCCTCGAATCAATTTTGCATGATTTTTAGCGCA
* * * * * * **
25184 AA-AGCTCCTTCAAATATTTATGTTTATCGAACAGAAATCTTAGCCATATTAAATATAAGGATTT
66 AAGA-CTCCTTGAAATATCTATATTCATCGAAC-CAAATCTTAGCCACATTGGATATAAGGATTT
* * * * *
25248 GTCTTTT-CGAGCATCTCAATCTTGTTTCAATATAATTAGAAATTATTTCGGAATAGAAAATGTA
129 GT-TTTTACGAGCATCTCAATCTTGTTTCGATTTAATTAGAAATTAATTC-GAA-AAAAAATGGA
* * * * * * *
25312 AAAACGATATTAGAAACGTGAAAAAACCCGTTAATCTTTCTGGCA-TTGAATTGTATAATTTTTC
191 AAAACGATATTAGAAGCGTGAAAAGA-CCATCAATCTTTTTGG-AGTTGAATTATATATTTTTTC
* * *
25376 TGAGTATTGTGGCAAAAAATTAAGAAAAAACTTTTCGTGTCAGTTTTTAGTCGAAAATCGTGTAC
254 TGAGTATTGTGGCAAAAAATTAGGAAAAAA-ATTTCGGGTCAGTTTTTAGTCG-AAATCGTGTAC
* * * * **
25441 TAACCATCACGGTTTTAGGTTAAAAACGCG-TTCAGGAGCCCCGAATAAATTTTGCATGATTTTT
317 TAACCATCACGGTTTTGGGCTAAAAACGCGTTTCGGGGGCCCCGGCTAAATTTTGCATGATTTTT
* * * *** *
25505 AGC-GCAAAGACTCCTTGAAATATCTATATTCATCGAACCAAATGTTAGCCACATTGGATATAAG
382 AGCAG-AAAGACTCCTTGAAATATCTACATTCATCAAACGAAATCCCAGCCACATTGGATATAAC
** ** **
25569 GATTTTTTTTTACGGGCATCTGAATCTTGTTTCGATTTAATTAGAAATTAATTCAGAAAAAAA-T
446 GATTAGTTTTTACAAGCATCCAAATCTTGTTTCGATTTAATTAGAAATTAATTCAGAAAAAAATT
* * * * *
25633 GGAAAAGCGATATTAGAAGCGTGAAAAGA-CCGTCAATCTTTTTGGAATTGAATTATATAT-TTT
511 GGAAAAACGATATTAGAAGTGTGAAAA-ACCCTTCAATCTTTTTTGCATTGAATTATATATATTT
** * * * * * * * *
25696 TTCTGAGTAGAGTGACAAAAAATTCAG-GACAAAA-GTTTCGG-GTC-AGTTATTAGCCGAAATC
575 TTCTGAGTATTGTGGCAAAGAATTGAGAAAAAAAATTTTTCGGTGTCAAATT-TTAGTCGAAATC
* * * * *
25757 GTGTA--CGTCACGGTTTTTGGGCTAAAAACGTGTTTCGGGGCCCCGGCTCAATTTTGCATGATT
639 GTGTACTCATCACGGTTTAT-GGCTAAAAACGCGTTCCGGGGCCCCGGCTCAATTTTGCAAGATT
* * * * * * * *
25820 TTTGGC-AGAAAGACTCCTTGAAATATCTACATTTGTCAAACGAAATCCCAGCCACATTTGATTT
703 TTTAGCTA-AAAGACTCCTTGAAATATCTATATTTATCGAACGAAATCTCAGCCATATTAGATAT
** * * * * *
25884 ATCGATTAGT-TTTTACAAGCATC-CAAATCTTGTTTCGATTTAATTAGAAATTAATTCGGAA-A
767 AAGGATTTGTCTTTTACGAGCATCTC-AATCTTGTTTCAATATAATTAGAAATTATTTCGGAATA
*** * * ** *
25946 AAAATTTGGAAAAACGATATTAGAAGTTTGAAAAACCC-TTCAATCTTTTTTGC-GCGAATTATA
831 AAAA--TGGAAAAACGATATTAGAAACGTGAAAAACCCGTT-AATCTTTCTGGCATTGAATTGTA
* * * ** * **
26009 TATATTTTTTCTGGGTATTGTGGTAAAGAATCGAGAAAAAAATTTCGGATCGGTTTGTGCAAAAT
893 TA-A-TTTTTCTGAGTATTGTGGCAAAAAATTAAGAAAAAACTTT----TC-G--TGT-C-AGTT
* *
26074 TTTAATCG-AAATCGTTTACT---C
947 TTTAGTCGAAAATCGTGTACTAACC
* * ** * **
26095 ATCACGGTTTATGGCTAAAAACGCGTTCCGGTGCCTCGGTTCAATTTTGCAAGATTTTTAGCTTA
1 ATCACGGTTTTTGGCTAAAAACGCGTTCCGGAGCCTCGAATCAATTTTGCATGATTTTTAGCGCA
* * * * * **
26160 AA-AGCTCCTTGAAATGTCTATATTTATCGAATACAAATCTCAGCCATATTTAATATAAGGATTT
66 AAGA-CTCCTTGAAATATCTATATTCATCGAA-CCAAATCTTAGCCACATTGGATATAAGGATTT
* * * *
26224 GTCTTTT-CGAGCATCTCAATCTTGTTTCAATATAATTAGAAATTATTTCGGAATAAAAATGGAA
129 GT-TTTTACGAGCATCTCAATCTTGTTTCGATTTAATTAGAAATTAATTC-GAAAAAAAATGGAA
* * * * * *
26288 AAACGATATTAGAAACGTGAGAAA-ACCCGTTAATCTTTCTGGCA-TTGAATTGTATAATTTTTC
192 AAACGATATTAGAAGCGTGA-AAAGA-CCATCAATCTTTTTGG-AGTTGAATTATATATTTTTTC
* * *
26351 TGAGTATTGTGGCAAAAAATTAAGAAAAAACTTTTCGTGTCAGTTTTTAGTCGAAAATCGTGTAC
254 TGAGTATTGTGGCAAAAAATTAGGAAAAAA-ATTTCGGGTCAGTTTTTAGTCG-AAATCGTGTAC
* * * **
26416 TAACCATCACGGTTTTTGGCTAAAAACGCG-TTCCGGAGCCCCGAATAAATTTTGCATGATTTTT
317 TAACCATCACGGTTTTGGGCTAAAAACGCGTTTCGGGGGCCCCGGCTAAATTTTGCATGATTTTT
* ** * *** *
26480 AGC-GCAAAGACTCCTTGAAATATCTATATTCATCGGACCAAATGTTAGCCACATTGGATATAAG
382 AGCAG-AAAGACTCCTTGAAATATCTACATTCATCAAACGAAATCCCAGCCACATTGGATATAAC
* ** **
26544 GATT-TTTTTTACGGGCATCTGAATCTTGTTTCGATTTAATTAGAAATTAATTCAGAAAAAAA-T
446 GATTAGTTTTTACAAGCATCCAAATCTTGTTTCGATTTAATTAGAAATTAATTCAGAAAAAAATT
* * * *
26607 GGAAAAGCGATATTAGAAGCGTGAAAAGA-CCATCAATC-TTTTTGGAGTTGAATTATATAT-TT
511 GGAAAAACGATATTAGAAGTGTGAAAA-ACCCTTCAATCTTTTTTGCA-TTGAATTATATATATT
* ** * * * * ** *
26669 TTTTTGAGTAGAGTGGCAAAAAATTCAGGACAAAAA--TTTCGG-GTCAGTTTTTAGCCGAAATC
574 TTTCTGAGTATTGTGGCAAAGAATTGAGAAAAAAAATTTTTCGGTGTCAAATTTTAGTCGAAATC
* * * *
26731 GTGTACTAACCATCACGGTTT-TGGGGCTAAAACCGTGTTTCGGGGGCCCCGGCTCAGTTTTGCA
639 GTGTACT---CATCACGGTTTAT--GGCTAAAAACGCG-TTCCGGGGCCCCGGCTCAATTTTGCA
* * * * * * * * *
26795 TGATTTTTCGC-AGAAAGACTCCTTGAAACATCTACATTTGTCAAACGAAATCCCAGCCACATTC
698 AGATTTTTAGCTA-AAAGACTCCTTGAAATATCTATATTTATCGAACGAAATCTCAGCCATATTA
* ** * * * * *
26859 GATTTATCGATTAGT-TTTTACAAGCATC-CAAATCTTGTTTCGATTTAATTAGAAATTAATTCG
762 GATATAAGGATTTGTCTTTTACGAGCATCTC-AATCTTGTTTCAATATAATTAGAAATTATTTCG
* *
26922 GAA-AAAAATTTGGAAAAATGATATTAGAAACGTGAGAAAACGCGTTAATCTTTCTGGCATTGAA
826 GAATAAAAA--TGGAAAAACGATATTAGAAACGTGA-AAAACCCGTTAATCTTTCTGGCATTGAA
*
26986 TTGTATAATTTTTCTGAGTATTGTGGCAAAAAATTGAGAAAAAACTTTTCGTGTCAGTTTTTAGT
888 TTGTATAATTTTTCTGAGTATTGTGGCAAAAAATTAAGAAAAAACTTTTCGTGTCAGTTTTTAGT
27051 CGAAAATCGTGTACTAACC
953 CGAAAATCGTGTACTAACC
* * * * **
27070 ATCACGGTTTATGGCTAAAAACGCGTTCCGGTGCCTCGACTTCAATTTTGCAAGATTTTTAGCTT
1 ATCACGGTTTTTGGCTAAAAACGCGTTCCGGAGCCTCGA-ATCAATTTTGCATGATTTTTAGCGC
* * * *
27135 AAA-AGCTCCTTCG-AATATCTATATTTATCGAACAGAAATCTCAGCCATATTGGATATAAGGAT
65 AAAGA-CTCCTT-GAAATATCTATATTCATCGAAC-CAAATCTTAGCCACATTGGATATAAGGAT
* * * *
27198 TTGTTTTCT-CGAGCATCTCAATCTTGTTTCAATATAATTAGAAATTATTTCGGAATAAAAATGG
127 TTGTTTT-TACGAGCATCTCAATCTTGTTTCGATTTAATTAGAAATTAATTC-GAAAAAAAATGG
* * * * * *
27262 GAAAACGATATTAGAAAG-GTGAAAAAACCCGTCAATCTTTCTGGCA-TTGAATTGTATAATTTT
190 AAAAACGATATTAG-AAGCGTGAAAAGA-CCATCAATCTTTTTGG-AGTTGAATTATATATTTTT
* * * * *
27325 TCTGAGTATTATGGC-AAACATTAAGAAAAAACTTTCGGGTCAATTTTTAGTCGAATATCGTGTA
252 TCTGAGTATTGTGGCAAAAAATTAGGAAAAAAATTTCGGGTCAGTTTTTAGTCGAA-ATCGTGTA
* * * * * **
27389 CTAACTATCACGGTTTTTGGCT-AAAACGCG-TTCCGGAGACCCGAATAAATTTTGCATGATTTT
316 CTAACCATCACGGTTTTGGGCTAAAAACGCGTTTCGGGGGCCCCGGCTAAATTTTGCATGATTTT
* * * ***
27452 TAGC-GCAAAGACTCATTGAAATATCTATATTCATCGAATC-AAATGTTAGCCACATTGGATATA
381 TAGCAG-AAAGACTCCTTGAAATATCTACATTCATC-AAACGAAATCCCAGCCACATTGGATATA
* * ** **
27515 AGGATT-TTTTTTACGGGCATCTGAATCTTGTTTCGATTTAATTAGAAATTAATTCAGAAAAAAA
444 ACGATTAGTTTTTACAAGCATCCAAATCTTGTTTCGATTTAATTAGAAATTAATTCAGAAAAAAA
** * * *
27579 AAGGAAAAACGATATTAGAAGCGTGAAAAGA-CCATCAATC-TTTTTGGAGTTGAATTATATAT-
509 TTGGAAAAACGATATTAGAAGTGTGAAAA-ACCCTTCAATCTTTTTTGCA-TTGAATTATATATA
** * * * * ** * *
27641 TTTTTCTGAGTAGAGTGGCAAAAAATTCAGGACAAAAA--TTTCGG-GTCAGTTTTTAGCCGCAA
572 TTTTTCTGAGTATTGTGGCAAAGAATTGAGAAAAAAAATTTTTCGGTGTCAAATTTTAGTCGAAA
* * *
27703 TCGTGTACTAACCATCACGGTTT-TGGGGCTAAAAACGTGATTCGGGGGCCCCGGCTCAGTTTTG
637 TCGTGTACT---CATCACGGTTTAT--GGCTAAAAACGCG-TTCCGGGGCCCCGGCTCAATTTTG
* * * * * * * *
27767 CATGATTTTTGGC-AGAAAGACTTCTTGAAATATCTACATTTGTCAAACGAAATCCCAGCCACAT
696 CAAGATTTTTAGCTA-AAAGACTCCTTGAAATATCTATATTTATCGAACGAAATCTCAGCCATAT
* * ** * * * * * *
27831 TCGATTTATCGATTAGT-TTTTACAAGCATC-CAAATCTTCTTTCGATTTAATTAGAAATTAATT
760 TAGATATAAGGATTTGTCTTTTACGAGCATCTC-AATCTTGTTTCAATATAATTAGAAATTATTT
*** * * *
27894 CGGAA-AAAAATTTGGAAAAACGATATTAGAAGTTTGAAAAACCC-TTCAATCTTTTTTGC-GTG
824 CGGAATAAAAA--TGGAAAAACGATATTAGAAACGTGAAAAACCCGTT-AATCTTTCTGGCATTG
* * * * ** * *
27956 AATTATATATATTTTTTCTGGGTATTGTGGTAAAGAATCGAGAAAAAAAATTCGGATCGGTTTGT
886 AATTGTATA-A-TTTTTCTGAGTATTGTGGCAAAAAATTAAG-AAAAAACTT---TTC-G--TGT
** * *
28021 GCAAAATTTTAATCG-AAATCGTTTACT---C
942 -C-AGTTTTTAGTCGAAAATCGTGTACTAACC
* * ** * **
28049 ATCACGGTTTATGGCTAAAAACGCGTTCCGGTGCCTCGGTTCAATTTTGCAAGATTTTTAGCTTA
1 ATCACGGTTTTTGGCTAAAAACGCGTTCCGGAGCCTCGAATCAATTTTGCATGATTTTTAGCGCA
* * * * * * **
28114 AA-AGCTCCTTCAAATATTTATGTTTATCGAACAGAAATCTTAGCCATATTAAATATAAGGATTT
66 AAGA-CTCCTTGAAATATCTATATTCATCGAAC-CAAATCTTAGCCACATTGGATATAAGGATTT
* * * * * *
28178 GTCTTTT-CGAGCATCTCAATCTTGTTTCAATATGATTAGAAATGATTTCGGAATAAAAATGGAA
129 GT-TTTTACGAGCATCTCAATCTTGTTTCGATTTAATTAGAAATTAATTC-GAAAAAAAATGGAA
* * * * * * *
28242 AAACGATATTAGAAACGTGAGAAA-ACCCGTTAATCCTTCTGGCA-TTGAATTGTATAATTTTTC
192 AAACGATATTAGAAGCGTGA-AAAGA-CCATCAATCTTTTTGG-AGTTGAATTATATATTTTTTC
* * *
28305 TGAGTATTGTGGCAAAAAATTAAGAAAAAACTTTTCGTGTCAGTTTTTAGTCGAAAATCGTGTAC
254 TGAGTATTGTGGCAAAAAATTAGGAAAAAA-ATTTCGGGTCAGTTTTTAGTCG-AAATCGTGTAC
* * * * **
28370 TAACCATCACTGATTTT-GGCTAAAAACGCG-TTCCGGAGCCTCGAATAAATTTTGCATGATTTT
317 TAACCATCAC-GGTTTTGGGCTAAAAACGCGTTTCGGGGGCCCCGGCTAAATTTTGCATGATTTT
* * * *** *
28433 TAGC-GCAAAGACTCCTTGAAATATCTATATTCATCGAACCAAATGTTAGTCACATTGGATATAA
381 TAGCAG-AAAGACTCCTTGAAATATCTACATTCATCAAACGAAATCCCAGCCACATTGGATATAA
* * **
28497 GGATT-TTTTTTACAAGCATCTGAATCTTGTTTCGATTTAATTAGAAATTAATTCAGAAAAAAA-
445 CGATTAGTTTTTACAAGCATCCAAATCTTGTTTCGATTTAATTAGAAATTAATTCAGAAAAAAAT
* * * *
28560 TGGAAAAGCGATATTAGAAGCGTGAAAAGA-CCATCAATC-TTTTTGGAGTTGAATTATATAT-T
510 TGGAAAAACGATATTAGAAGTGTGAAAA-ACCCTTCAATCTTTTTTGCA-TTGAATTATATATAT
** * * * ** *
28622 TTTTCTGAGTAGAGTGGCAAAAAATTCAGGAAAAAAA--TTTCGG-GTCAGTTTTTAGCCGAAAA
573 TTTTCTGAGTATTGTGGCAAAGAATTGAGAAAAAAAATTTTTCGGTGTCAAATTTTAGTCG-AAA
* * *
28684 TCGTGT-CATAACCATCACGGTTT-TGGGGCTAAAAACGTGTTTCGGGGGCCCCGGCTCAGTTTT
637 TCGTGTAC-T---CATCACGGTTTAT--GGCTAAAAACGCG-TTCCGGGGCCCCGGCTCAATTTT
* * * * ** * *
28747 GCATGATTTTTGGC-AGAATGACTCCTTGAAATATCTACATTCGTCAAACGAAATCCCAGCCATA
695 GCAAGATTTTTAGCTA-AAAGACTCCTTGAAATATCTATATTTATCGAACGAAATCTCAGCCATA
* * ** * * * * *
28811 TTCGATTTATCGATTAGT-TTTTACAAGCATC-CTAATCTTGTTTCGATTTAATTAGAAATTAAT
759 TTAGATATAAGGATTTGTCTTTTACGAGCATCTC-AATCTTGTTTCAATATAATTAGAAATTATT
* *** * * *
28874 TCGGAA-AAAAATTGGAAAAATGATATTAGAAGTTTGAAAAACCC-TTCAATTTTTTTTGCA-TG
823 TCGGAATAAAAA-TGGAAAAACGATATTAGAAACGTGAAAAACCCGTT-AATCTTTCTGGCATTG
* * * * * * * *
28936 AATTATATATATTTTTTCTGGGTATTGTGGTAAAGAATTGATAAAAAAAATTTCGAATTGGTTTA
886 AATTGTATA-A-TTTTTCTGAGTATTGTGGCAAAAAATT-A-AGAAAAAACTT----TTCG--TG
** * * *
29001 TGCAAAATTTGATTCG-AAATCGTTTACT---C
941 T-C-AGTTTTTAGTCGAAAATCGTGTACTAACC
* * * * * **
29030 ATCACGGTTTATGGCTAAAAACGCGTTCTGGTGCCTCGACTCAATTTTGCAAGATTTTTAGCTTA
1 ATCACGGTTTTTGGCTAAAAACGCGTTCCGGAGCCTCGAATCAATTTTGCATGATTTTTAGC-GC
* * * * * *
29095 AAAGA-TCCTTTAAATATTTATGTTTATCGAACAGAAATCTTAGCCATATTGGATATAAGGATTT
65 AAAGACTCCTTGAAATATCTATATTCATCGAAC-CAAATCTTAGCCACATTGGATATAAGGATTT
* * *
29159 GTTTTCT-CGAGCATCTCAATCTTGTTTCAATATAATTAGAAATTATTTCGAAAAAAAATGGAAA
129 GTTTT-TACGAGCATCTCAATCTTGTTTCGATTTAATTAGAAATTAATTCGAAAAAAAATGGAAA
* * ** * * * * **
29223 AACAATATTTGAAGTTTGAAAA-ACCTTTCAATATTTTTTGCG-TGCGTTATATATATTTTTTCT
193 AACGATATTAGAAGCGTGAAAAGACC-ATCAATCTTTTTGGAGTTG-AAT-TATATATTTTTTCT
* * ** * **
29286 GGGTATTGTGGTAAGGAATTGAGAAAAAAAATTTCGGATCGGTTTGTGCAAAATTTTA-TCGAAA
255 GAGTATTGTGGCAAAAAATT-AGGAAAAAAA-TT----TCGG---GT-C-AGTTTTTAGTCGAAA
* * * * * *
29350 TCGTTTACT---CATCACGGTTTAT-GGCTAAAAATGCG-TTCCGGTGCCTCGGCTCAATTTTGC
309 TCGTGTACTAACCATCACGGTTT-TGGGCTAAAAACGCGTTTCGGGGGCCCCGGCTAAATTTTGC
* * * ** * * ** * *
29410 AAGATTTTTAGCTTA-AAAG-CTCCTTCAAATATTTATGTTTATCGAACAGAAATCTTAGTCATA
373 ATGATTTTTAGC--AGAAAGACTCCTTGAAATATCTACATTCATCAAAC-GAAATCCCAGCCACA
* * * * * *
29473 TTGGATATAAGGATTTGTTTTCT-CGAGCATCTC-AATCTTGTTTCAATATAATTAGAAATTATT
435 TTGGATATAACGATTAGTTTT-TACAAGCATC-CAAATCTTGTTTCGATTTAATTAGAAATTAAT
* * * * *
29536 TC-GTAATAAAAA-TGGGAAAACGATATTAGAAACT-TGAAAAAACCCGTCAATCTTTCTGGCAT
498 TCAG-AA-AAAAATTGGAAAAACGATATTAG-AAGTGTG-AAAAACCCTTCAATCTTTTTTGCAT
* * * ** * *
29598 TGAATTGTATA-ATTTTTCTGAGTATTGTGGCAAAAAATT-AG-GAAACTACTTTTCGG-GTCAG
559 TGAATTATATATATTTTTCTGAGTATTGTGGCAAAGAATTGAGAAAAAAAATTTTTCGGTGTCAA
* * * *
29659 TTTTTAGTCGAAAATCGTGTACTAACCATCACGGTTTTTGGCTAAAAACGCGTTCCGGAGCCCCA
624 ATTTTAGTCG-AAATCGTGTACT---CATCACGGTTTATGGCTAAAAACGCGTTCCGGGGCCCCG
** * * * *
29724 AATAAATTTTGCATGA-TTTTAGGC--AAAGACTCCTTGAAATATCTATATTCATCGAACCAAAT
685 GCTCAATTTTGCAAGATTTTTA-GCTAAAAGACTCCTTGAAATATCTATATTTATCGAACGAAAT
* * ** * * ** *
29786 GTCAGCCACATCGGATATAAGGATTTG-CTTTTACGGGCATCTGAATCTTGTTTTGATTTAATTA
749 CTCAGCCATATTAGATATAAGGATTTGTCTTTTACGAGCATCTCAATCTTGTTTCAATATAATTA
* * * * * *
29850 GAAATTAATTCAGGAAAAAAAATGGGAAAACGATATTAGAAGCGTGAAAAGA-CCATCAATCTTT
814 GAAATTATTTC-GGAATAAAAATGGAAAAACGATATTAGAAACGTGAAAA-ACCCGTTAATCTTT
* * * ** ** * * * * *
29914 TTGG-AGTTGAATTATATATTTTTTCAAAGTAGAGTGGCAAAGAATTCAGGAAAAAA-ATATCGG
877 CTGGCA-TTGAATTGTATAATTTTTCTGAGTATTGTGGCAAAAAATT-AAGAAAAAACTTTTCGT
*
29977 GTCAGTTTTTAGCCGAAAATCGTGTACGT----
940 GTCAGTTTTTAGTCGAAAATCGTGTAC-TAACC
* * * * * ** * *
30006 -T-ACGGTTTTGGGGCTAAAAACGTGTTTCGGGGGCCCCGGCTCAGTTTTGCATGATTTTTGGCA
1 ATCACGGTTTT-TGGCTAAAAACGCG-TTCCGGAGCCTCGAATCAATTTTGCATGATTTTTAGC-
* * * * ** * * **
30069 G-AAAGACTCCTTGAAATATCTACATTCGTCAAACGAAATCCCAGCCACATTCGATTTATCGATT
63 GCAAAGACTCCTTGAAATATCTATATTCATCGAACCAAATCTTAGCCACATTGGATATAAGGATT
* * *
30133 AGTTTTTACAAGCATC-CTAATCTTGTTTCGATTTAATTAGAAATTAATTCGGAAAAAAATTGGA
128 TGTTTTTACGAGCATCTC-AATCTTGTTTCGATTTAATTAGAAATTAATTC-GAAAAAAAATGGA
* ** * * *
30197 AAAATGATATTAGAAGTTTGAAAA-ACCCTTCAATCTTTTTTGCG-TGAATTATATATATATTTT
191 AAAACGATATTAGAAGCGTGAAAAGA-CCATCAATCTTTTTGGAGTTGAATTATATAT-T-TTTT
* * * * * *
30260 CTGGGTATTGTGGTAAAGAATT-GAGAAAAAATTTTCGGAT-AGGTTTGTGCAAAATTTCGTTCG
253 CTGAGTATTGTGGCAAAAAATTAG-GAAAAAAATTTCGGGTCA-G--T-T------TTTAG-TCG
* * * * * * * *
30323 AAATCGTTTACT---CATCACGGTTTAT-GGCTGAAAACGCG-ATCTGGTGCCTCGACTCAATTT
306 AAATCGTGTACTAACCATCACGGTTT-TGGGCTAAAAACGCGTTTCGGGGGCCCCGGCTAAATTT
* * * ** * * **
30383 TGCAAGATTTTTAGCTTA-AAAGA-TCCTTTAAATATTTATGTTTATCGAACAGAAATCTTAGCC
370 TGCATGATTTTTAGC--AGAAAGACTCCTTGAAATATCTACATTCATCAAAC-GAAATCCCAGCC
* * * * * *
30446 ATATTGGATATAAGGATTTGTTTTCT-CGAGCATCTC-AATCTTGTTTCAATATAATTAGAAATT
432 ACATTGGATATAACGATTAGTTTT-TACAAGCATC-CAAATCTTGTTTCGATTTAATTAGAAATT
* * * * * *
30509 ATTTCGGAATAAAAA-TGGGAAAACGATATTAGAAAG-GTGAAAAAACCCGTCAATCTTTCTGGC
495 AATTCAGAA-AAAAATTGGAAAAACGATATTAG-AAGTGTG-AAAAACCCTTCAATCTTTTTTGC
* * *
30572 ATTGAATTGTATA-ATTTTTCTGAGTATTGTGGCAAA-AATTAAG-AAAAAAACTTTTCGG-GTC
557 ATTGAATTATATATATTTTTCTGAGTATTGTGGCAAAGAATTGAGAAAAAAAATTTTTCGGTGTC
* * * *
30633 AATTTTTAGTCGAATATCGTGTACTAACCATCACGGTTTTTGGCTAAAACCGCGTTCCGGAGCCC
622 AAATTTTAGTCGAA-ATCGTGTACT---CATCACGGTTTATGGCTAAAAACGCGTTCCGGGGCCC
** * ** ** ** *
30698 CGAATAAATTTTGCATCATTTTTAGCGCAAAGACTCCTTGAAATATCTATATGCATCGAACCAAA
683 CGGCTCAATTTTGCAAGATTTTTAGCTAAAAGACTCCTTGAAATATCTATATTTATCGAACGAAA
* * * * * * *
30763 TGTCAACCACATTGGATATAAGGATTTGT-TTTTACGGGCATCTGAATCTTGTTTC--GAT--TT
748 TCTCAGCCATATTAGATATAAGGATTTGTCTTTTACGAGCATCTCAATCTTGTTTCAATATAATT
* * * * *
30823 ---AATTA-----GAA-AAAAATGGAAAAAGGATATTAGAAGCATGAAAAGA-CCATCAATCTTT
813 AGAAATTATTTCGGAATAAAAATGGAAAAACGATATTAGAAACGTGAAAA-ACCCGTTAATCTTT
* * * ** * *
30878 TTGG-AGTTGAATTATATATTTTTTCTGAGTAGAGTGGCAAAAAATTCAGGAAAAACTTTTCG-G
877 CTGGCA-TTGAATTGTATAATTTTTCTGAGTATTGTGGCAAAAAATTAAGAAAAAACTTTTCGTG
* *
30941 ATCGGTTTTTAGTCGAAAATCGTGTACTAACT
941 -TCAGTTTTTAGTCGAAAATCGTGTACTAACC
* * * * * * *
30973 ATCACGGTTTTGGGGCTAAAAACGTGTTTCGGGGGCCTCGACTCAGTTTTGCATGATTTTTGGCA
1 ATCACGGTTTT-TGGCTAAAAACGCG-TTCCGGAGCCTCGAATCAATTTTGCATGATTTTTAGC-
* * * * * * * ** *
31038 G-AAAGACTCGTTGAAATATCTACATTCATCAAACTAAATCTTAGCGACATTTGATTTATTGATA
63 GCAAAGACTCCTTGAAATATCTATATTCATCGAACCAAATCTTAGCCACATTGGATATAAGGATT
* * *
31102 AG-TTTTACAAGCATC-CAAATCTTGTTTCGATTTAATTTGAAATTAATTCGGAAAAAAAAATAG
128 TGTTTTTACGAGCATCTC-AATCTTGTTTCGATTTAATTAGAAATTAATTC-G-AAAAAAAAT-G
** * * * *
31165 GAAAAACGATATTAGAAGTTTGAAAA-ACCCTTCAATTTTTTTTGCG-TGAATTATATATATTTT
189 GAAAAACGATATTAGAAGCGTGAAAAGA-CCATCAATCTTTTTGGAGTTGAATTATATAT-TTTT
* * * * * ** *
31228 TTTGGGTATTGTGGTAAAGAATTGAGAAAAAAAATTTTCGGAACGGTTTGTGCAAAATTTTATTC
252 TCTGAGTATTGTGGCAAAAAATT-AGGAAAAAAA-TTT-----CGG---GT-C-AGTTTTTAGTC
* * * * * *
31293 GAAATCGTTTACT---CATCATGGTTTAT-GGCTAAAAACGCG-TTCCGGGGCCTCTGCTCAATT
305 GAAATCGTGTACTAACCATCACGGTTT-TGGGCTAAAAACGCGTTTCGGGGGCCCCGGCTAAATT
* * * * * * *
31353 TTGCAAGAGTTTTAGCTTA-AAAG-CTCCTTCAAATATCTATATTTATCGAACAGAAATCTCAGC
369 TTGCATGATTTTTAGC--AGAAAGACTCCTTGAAATATCTACATTCATCAAAC-GAAATCCCAGC
* * * * *
31416 CATATTGGATATAAGGATTTGTCTTTT-CAAGCATCTC-AATCTTGTTTCAATATAATTAGAAAT
431 CACATTGGATATAACGATTAGT-TTTTACAAGCATC-CAAATCTTGTTTCGATTTAATTAGAAAT
* * * *
31479 TATTTCGAGAAAAAAA-TGGAAAAACGATATTTGAAGTTTGAAAAACCTTTCAAT
494 TAATTC-AGAAAAAAATTGGAAAAACGATATTAGAAGTGTGAAAAACCCTTCAAT
31533 ATTCTAATTA
Statistics
Matches: 14054, Mismatches: 869, Indels: 636
0.90 0.06 0.04
Matches are distributed among these distances:
963 8 0.00
964 116 0.01
965 3 0.00
967 1 0.00
968 49 0.00
969 150 0.01
970 84 0.01
971 238 0.02
972 634 0.05
973 556 0.04
974 852 0.06
975 584 0.04
976 1125 0.08
977 619 0.04
978 617 0.04
979 839 0.06
980 1386 0.10
981 2887 0.21
982 975 0.07
983 457 0.03
984 49 0.00
985 381 0.03
986 138 0.01
987 358 0.03
988 276 0.02
989 130 0.01
990 25 0.00
991 510 0.04
992 7 0.00
ACGTcount: A:0.34, C:0.15, G:0.17, T:0.34
Consensus pattern (971 bp):
ATCACGGTTTTTGGCTAAAAACGCGTTCCGGAGCCTCGAATCAATTTTGCATGATTTTTAGCGCA
AAGACTCCTTGAAATATCTATATTCATCGAACCAAATCTTAGCCACATTGGATATAAGGATTTGT
TTTTACGAGCATCTCAATCTTGTTTCGATTTAATTAGAAATTAATTCGAAAAAAAATGGAAAAAC
GATATTAGAAGCGTGAAAAGACCATCAATCTTTTTGGAGTTGAATTATATATTTTTTCTGAGTAT
TGTGGCAAAAAATTAGGAAAAAAATTTCGGGTCAGTTTTTAGTCGAAATCGTGTACTAACCATCA
CGGTTTTGGGCTAAAAACGCGTTTCGGGGGCCCCGGCTAAATTTTGCATGATTTTTAGCAGAAAG
ACTCCTTGAAATATCTACATTCATCAAACGAAATCCCAGCCACATTGGATATAACGATTAGTTTT
TACAAGCATCCAAATCTTGTTTCGATTTAATTAGAAATTAATTCAGAAAAAAATTGGAAAAACGA
TATTAGAAGTGTGAAAAACCCTTCAATCTTTTTTGCATTGAATTATATATATTTTTCTGAGTATT
GTGGCAAAGAATTGAGAAAAAAAATTTTTCGGTGTCAAATTTTAGTCGAAATCGTGTACTCATCA
CGGTTTATGGCTAAAAACGCGTTCCGGGGCCCCGGCTCAATTTTGCAAGATTTTTAGCTAAAAGA
CTCCTTGAAATATCTATATTTATCGAACGAAATCTCAGCCATATTAGATATAAGGATTTGTCTTT
TACGAGCATCTCAATCTTGTTTCAATATAATTAGAAATTATTTCGGAATAAAAATGGAAAAACGA
TATTAGAAACGTGAAAAACCCGTTAATCTTTCTGGCATTGAATTGTATAATTTTTCTGAGTATTG
TGGCAAAAAATTAAGAAAAAACTTTTCGTGTCAGTTTTTAGTCGAAAATCGTGTACTAACC
Found at i:31677 original size:176 final size:176
Alignment explanation
Indices: 31372--31708 Score: 448
Period size: 176 Copynumber: 1.9 Consensus size: 176
31362 TTTTAGCTTA
* * * * * * *
31372 AAAGCTCCTTCAAATATCTATATTTATCGAACAGAAATCTCAGCCATATTGGATATAAGGATTTG
1 AAAGCTCCTTCAAATATCTACATTCATCAAACAGAAATCCCAGCCATATTCGATATAACGATTAG
*
31437 TCTTTTCAAGCATCTCAATCTTGTTTCAATATAATTAGAAATTATTTCGAGAAAAAAATGGAAAA
66 TCTTTTCAAGCATCTCAATCTTGTTTCAATATAATTAGAAATTAATTCGAGAAAAAAATGGAAAA
* *
31502 ACGATATTTGAAGTTTGAAAAACCTTTCAATATTCTAATTAAATCG
131 ACGATATTAGAAGTTTGAAAAACCCTTCAATATTCTAATTAAATCG
* * * *
31548 AAAGACTCCTTGAAATATCTACATTCGTCAAAC-GAAATCCCAGCCATATTCGATTTATCGATTA
1 AAAG-CTCCTTCAAATATCTACATTCATCAAACAGAAATCCCAGCCATATTCGATATAACGATTA
* * *
31612 GT-TTTTACAAGTATC-CTAATCTTGTTTCGATTTAATTAGAAATTAATTCG-GAAAAAAATTGG
65 GTCTTTT-CAAGCATCTC-AATCTTGTTTCAATATAATTAGAAATTAATTCGAGAAAAAAA-TGG
*
31674 AAAAATGATATTAGAAGTTTGAAAAACCCTTCAAT
127 AAAAACGATATTAGAAGTTTGAAAAACCCTTCAAT
31709 CTTTTTTGCG
Statistics
Matches: 139, Mismatches: 18, Indels: 8
0.84 0.11 0.05
Matches are distributed among these distances:
175 13 0.09
176 103 0.74
177 23 0.17
ACGTcount: A:0.39, C:0.15, G:0.12, T:0.34
Consensus pattern (176 bp):
AAAGCTCCTTCAAATATCTACATTCATCAAACAGAAATCCCAGCCATATTCGATATAACGATTAG
TCTTTTCAAGCATCTCAATCTTGTTTCAATATAATTAGAAATTAATTCGAGAAAAAAATGGAAAA
ACGATATTAGAAGTTTGAAAAACCCTTCAATATTCTAATTAAATCG
Found at i:31946 original size:509 final size:508
Alignment explanation
Indices: 31038--32041 Score: 1744
Period size: 509 Copynumber: 2.0 Consensus size: 508
31028 ATTTTTGGCA
* * ** * * *
31038 GAAAGACTCGTTGAAATATCTACATTCATCAAACTAAATCTTAGCGACATTTGATTTATTGATAA
1 GAAAGACTCCTTGAAATATCTACATTCATCAAACGAAATCCCAGCCACATTCGATTTATCGATAA
*
31103 GTTTTACAAGCATCCAAATCTTGTTTCGATTTAATTTGAAATTAATTCGGAAAAAAAAATAGGAA
66 GTTTTACAAGCATCCAAATCTTGTTTCGATTTAATTAGAAATTAATTCGG-AAAAAAAATAGGAA
* *
31168 AAACGATATTAGAAGTTTGAAAAACCCTTCAATTTTTTTTGCGTGAATTATATATATTTTTTTGG
130 AAACGATATTAGAAGTTTGAAAAACCCTTCAATCTTTTTTGCGTGAATTATATATATTTTTTAGG
31233 GTATTGTGGTAAAGAATTGAGAAAAAAAATTTTCGGAACGGTTTGTGCAAAATTTTATTCGAAAT
195 GTATTGTGGTAAAGAATTGAGAAAAAAAATTTTCGGAACGGTTTGTGCAAAATTTTATTCGAAAT
*
31298 CGTTTACTCATCATGGTTTATGGCTAAAAACGCGTTCCGGGGCCTCTGCTCAATTTTGCAAGAGT
260 CGTTTACTCATCACGGTTTATGGCTAAAAACGCGTTCCGGGGCCTCTGCTCAATTTTGCAAGAGT
31363 TTTAGCTTAAAAGCTCCTTCAAATATCTATATTTATCGAACAGAAATCTCAGCCATATTGGATAT
325 TTTAGCTTAAAAGCTCCTTCAAATATCTATATTTATCGAACAGAAATCTCAGCCATATTGGATAT
31428 AAGGATTTGTCTTT-TCAAGCATCTCAATCTTGTTTCAATATAATTAGAAATTATTTCGAGAA-A
390 AAGGATTTGT-TTTCTCAAGCATCTCAATCTTGTTTCAATATAATTAGAAATTATTTCG-GAATA
* *
31491 AAAATGGAAAAACGATATTTGAAGTTTGAAAAACCTTTCAATATTCTAATTAAATC
453 AAAATGGAAAAACGATATTAGAAGTTTGAAAAACCCTTCAATATTCTAATTAAATC
* * *
31547 GAAAGACTCCTTGAAATATCTACATTCGTCAAACGAAATCCCAGCCATATTCGATTTATCGATTA
1 GAAAGACTCCTTGAAATATCTACATTCATCAAACGAAATCCCAGCCACATTCGATTTATCGATAA
* * *
31612 GTTTTTACAAGTATCCTAATCTTGTTTCGATTTAATTAGAAATTAATTCGG-AAAAAAATTGGAA
66 G-TTTTACAAGCATCCAAATCTTGTTTCGATTTAATTAGAAATTAATTCGGAAAAAAAATAGGAA
*
31676 AAATGATATTAGAAGTTTGAAAAACCCTTCAATCTTTTTTGCGTGAATTATATATATTTTTTCAG
130 AAACGATATTAGAAGTTTGAAAAACCCTTCAATCTTTTTTGCGTGAATTATATATATTTTTT-AG
31741 GGTATTGTGGTAAAGAATTGAGAAAAAAAATTTTCGGAACGGTTTGTGCAAAATTTTATTCGAAA
194 GGTATTGTGGTAAAGAATTGAGAAAAAAAATTTTCGGAACGGTTTGTGCAAAATTTTATTCGAAA
31806 TCGTTTACTCATCACGGTTTATGGCTAAAAACGCGTTCCGGGGCCTCTGCTCAATTTTGCAAGAG
259 TCGTTTACTCATCACGGTTTATGGCTAAAAACGCGTTCCGGGGCCTCTGCTCAATTTTGCAAGAG
31871 TTTTAGCTTAAAAGCTCCTTCAAATATCTATATTTATCGAACAGAAATCTCAGCCATATTGGATA
324 TTTTAGCTTAAAAGCTCCTTCAAATATCTATATTTATCGAACAGAAATCTCAGCCATATTGGATA
* *
31936 TAAGGATTTGTTTTCTCGAGCCTCTCAATCTTGTTTCAATATAATTAGAAATTATTTCGGAATAA
389 TAAGGATTTGTTTTCTCAAGCATCTCAATCTTGTTTCAATATAATTAGAAATTATTTCGGAATAA
32001 AAATGGAAAAACGATATTAGAAGTTTGAAAAACCCTTCAAT
454 AAATGGAAAAACGATATTAGAAGTTTGAAAAACCCTTCAAT
32042 CTTTTTTGCG
Statistics
Matches: 469, Mismatches: 22, Indels: 8
0.94 0.04 0.02
Matches are distributed among these distances:
508 78 0.17
509 345 0.74
510 46 0.10
ACGTcount: A:0.35, C:0.14, G:0.15, T:0.35
Consensus pattern (508 bp):
GAAAGACTCCTTGAAATATCTACATTCATCAAACGAAATCCCAGCCACATTCGATTTATCGATAA
GTTTTACAAGCATCCAAATCTTGTTTCGATTTAATTAGAAATTAATTCGGAAAAAAAATAGGAAA
AACGATATTAGAAGTTTGAAAAACCCTTCAATCTTTTTTGCGTGAATTATATATATTTTTTAGGG
TATTGTGGTAAAGAATTGAGAAAAAAAATTTTCGGAACGGTTTGTGCAAAATTTTATTCGAAATC
GTTTACTCATCACGGTTTATGGCTAAAAACGCGTTCCGGGGCCTCTGCTCAATTTTGCAAGAGTT
TTAGCTTAAAAGCTCCTTCAAATATCTATATTTATCGAACAGAAATCTCAGCCATATTGGATATA
AGGATTTGTTTTCTCAAGCATCTCAATCTTGTTTCAATATAATTAGAAATTATTTCGGAATAAAA
ATGGAAAAACGATATTAGAAGTTTGAAAAACCCTTCAATATTCTAATTAAATC
Found at i:32222 original size:332 final size:331
Alignment explanation
Indices: 31629--32441 Score: 1283
Period size: 332 Copynumber: 2.4 Consensus size: 331
31619 CAAGTATCCT
* * * *
31629 AATCTTGTTTCGATTTAATTAGAAATTAATTCGGAA-AAAAATTGGAAAAATGATATTAGAAGTT
1 AATCTTGTTTCAATATAATTAGAAATTATTTCGGAATAAAAA-TGGAAAAACGATATTAGAAGTT
31693 TGAAAAACCCTTCAATCTTTTTTGCGTGAATTATATATATTTTTTCAGGGTATTGTGGTAAAGAA
65 TGAAAAACCCTTCAATCTTTTTTGCGTGAATTATATATATTTTTTCAGGGTATTGTGGTAAAGAA
31758 TTGAGAAAAAAAATTTTCGGAACGGTTTGTGCAAAATTTTATTCGAAATCGTTTACTCATCACGG
130 TTGAG--AAAAAATTTTCGGAACGGTTTGTGCAAAATTTTATTCGAAATCGTTTACTCATCACGG
* *
31823 TTTATGGCTAAAAACGCGTTCCGGGGCCTCTGCTCAATTTTGCAAGAGTTTTAGCTTAAAAGCTC
193 TTTATGGCTAAAAACGCGTTCCGGGGCCTCGGCTCAATTTCGCAAGAGTTTTAGCTTAAAAGCTC
31888 CTTCAAATATCTATATTTATCGAACAGAAATCTCAGCCATATTGGATATAAGGATTTGTTTTCTC
258 CTTCAAATATCTATATTTATCGAACAGAAATCTCAGCCATATTGGATATAAGGATTTGTTTTCTC
*
31953 GAGCCTCTC
323 GAGCATCTC
31962 AATCTTGTTTCAATATAATTAGAAATTATTTCGGAATAAAAATGGAAAAACGATATTAGAAGTTT
1 AATCTTGTTTCAATATAATTAGAAATTATTTCGGAATAAAAATGGAAAAACGATATTAGAAGTTT
32027 GAAAAACCCTTCAATCTTTTTTGCGTGAATTATATATATTTTTTCAGGGTATTGTGGTAAAGAAT
66 GAAAAACCCTTCAATCTTTTTTGCGTGAATTATATATATTTTTTCAGGGTATTGTGGTAAAGAAT
32092 TGAGAAAAACATTTTCGGAACGGTTTGTGCAAAATTTTATTCGAAATCGTTTACTCATCACGGTT
131 TGAGAAAAA-ATTTTCGGAACGGTTTGTGCAAAATTTTATTCGAAATCGTTTACTCATCACGGTT
* *
32157 TATGGCTAAAAACGCGTTCCGGTGCCTCGGCTCAATTTCGCAAGA-TATTTAGCTTAAAGGCTCC
195 TATGGCTAAAAACGCGTTCCGGGGCCTCGGCTCAATTTCGCAAGAGT-TTTAGCTTAAAAGCTCC
* * *
32221 TTCAAATATTTATGTTTATCGAACAGAAATCTTAGCCATATTGGATATAAGGATTTGTTTTCTCG
259 TTCAAATATCTATATTTATCGAACAGAAATCTCAGCCATATTGGATATAAGGATTTGTTTTCTCG
32286 AGCATCTC
324 AGCATCTC
* * ***
32294 AATCTTGTTTCAATATAATTAGAAATGATTTCGGAATAAAAATGGGAAAACGATATTAGAAACGT
1 AATCTTGTTTCAATATAATTAGAAATTATTTCGGAATAAAAATGGAAAAACGATATTAGAAGTTT
* * * * * * * * *
32359 GAAAAAACCCGTCAATCTTTCTGGCATTGAATTGTATA-A-TTTTTCTGAGTATTGTGGCAAAAA
66 G-AAAAACCCTTCAATCTTTTTTGC-GTGAATTATATATATTTTTTCAGGGTATTGTGGTAAAGA
*
32422 ATTAAGAAAAAACTTTTCGG
129 ATTGAGAAAAAA-TTTTCGG
32442 GTCAGTTTTT
Statistics
Matches: 447, Mismatches: 27, Indels: 13
0.92 0.06 0.03
Matches are distributed among these distances:
331 7 0.02
332 280 0.63
333 145 0.32
334 15 0.03
ACGTcount: A:0.34, C:0.14, G:0.17, T:0.35
Consensus pattern (331 bp):
AATCTTGTTTCAATATAATTAGAAATTATTTCGGAATAAAAATGGAAAAACGATATTAGAAGTTT
GAAAAACCCTTCAATCTTTTTTGCGTGAATTATATATATTTTTTCAGGGTATTGTGGTAAAGAAT
TGAGAAAAAATTTTCGGAACGGTTTGTGCAAAATTTTATTCGAAATCGTTTACTCATCACGGTTT
ATGGCTAAAAACGCGTTCCGGGGCCTCGGCTCAATTTCGCAAGAGTTTTAGCTTAAAAGCTCCTT
CAAATATCTATATTTATCGAACAGAAATCTCAGCCATATTGGATATAAGGATTTGTTTTCTCGAG
CATCTC
Found at i:33450 original size:58 final size:58
Alignment explanation
Indices: 33360--33475 Score: 214
Period size: 58 Copynumber: 2.0 Consensus size: 58
33350 TCAAATGAAC
* *
33360 CAAGTCTCAACCACTATGGGGTTGGATGAAGTGATAAGTGGCTTGTTTTGTTTCAGTT
1 CAAGTCTCAACCACTATGGGATTGGATGAAGTGATAAGCGGCTTGTTTTGTTTCAGTT
33418 CAAGTCTCAACCACTATGGGATTGGATGAAGTGATAAGCGGCTTGTTTTGTTTCAGTT
1 CAAGTCTCAACCACTATGGGATTGGATGAAGTGATAAGCGGCTTGTTTTGTTTCAGTT
33476 TAAGCAGATT
Statistics
Matches: 56, Mismatches: 2, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
58 56 1.00
ACGTcount: A:0.23, C:0.15, G:0.27, T:0.35
Consensus pattern (58 bp):
CAAGTCTCAACCACTATGGGATTGGATGAAGTGATAAGCGGCTTGTTTTGTTTCAGTT
Found at i:36238 original size:34 final size:34
Alignment explanation
Indices: 36176--36314 Score: 230
Period size: 34 Copynumber: 4.2 Consensus size: 34
36166 GTTTCATCGG
36176 CCCTGCCCAGTGGG-T-T-ATAATAACTGGAAGA
1 CCCTGCCCAGTGGGTTGTGATAATAACTGGAAGA
* *
36207 CTCTGCCCAGTGGGTTGTGATAATAATTGGAAGA
1 CCCTGCCCAGTGGGTTGTGATAATAACTGGAAGA
*
36241 CCCTGCCCAGTGGGTTGTGAAAATAACTGGAAGA
1 CCCTGCCCAGTGGGTTGTGATAATAACTGGAAGA
36275 CCCTGCCCAGTGGGTTGTGATAATAACTGGAAGA
1 CCCTGCCCAGTGGGTTGTGATAATAACTGGAAGA
36309 CCCTGC
1 CCCTGC
36315 TAACGGGTTA
Statistics
Matches: 99, Mismatches: 6, Indels: 3
0.92 0.06 0.03
Matches are distributed among these distances:
31 13 0.13
32 1 0.01
33 1 0.01
34 84 0.85
ACGTcount: A:0.27, C:0.22, G:0.28, T:0.24
Consensus pattern (34 bp):
CCCTGCCCAGTGGGTTGTGATAATAACTGGAAGA
Found at i:39060 original size:20 final size:20
Alignment explanation
Indices: 39035--39076 Score: 75
Period size: 20 Copynumber: 2.1 Consensus size: 20
39025 ATAAACACAC
39035 ATTTCTTGAAAGTCTTATAT
1 ATTTCTTGAAAGTCTTATAT
*
39055 ATTTCTTGAAATTCTTATAT
1 ATTTCTTGAAAGTCTTATAT
39075 AT
1 AT
39077 AAAAGTCTTT
Statistics
Matches: 21, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
20 21 1.00
ACGTcount: A:0.31, C:0.10, G:0.07, T:0.52
Consensus pattern (20 bp):
ATTTCTTGAAAGTCTTATAT
Found at i:54136 original size:25 final size:25
Alignment explanation
Indices: 54086--54137 Score: 70
Period size: 25 Copynumber: 2.1 Consensus size: 25
54076 CTGTCAAATT
* *
54086 AAATGAGCGGAACGGAAGCTATAAA
1 AAATGAGCGGAACGGAACCTAGAAA
54111 AAATGAGCGGAACGGAACCCT-GAAA
1 AAATGAGCGGAACGGAA-CCTAGAAA
54136 AA
1 AA
54138 TAGTATATAT
Statistics
Matches: 24, Mismatches: 2, Indels: 2
0.86 0.07 0.07
Matches are distributed among these distances:
25 22 0.92
26 2 0.08
ACGTcount: A:0.48, C:0.15, G:0.27, T:0.10
Consensus pattern (25 bp):
AAATGAGCGGAACGGAACCTAGAAA
Found at i:58964 original size:2 final size:2
Alignment explanation
Indices: 58957--58988 Score: 64
Period size: 2 Copynumber: 16.0 Consensus size: 2
58947 TTCACCATTA
58957 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
58989 TTTAGAATCT
Statistics
Matches: 30, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 30 1.00
ACGTcount: A:0.50, C:0.00, G:0.00, T:0.50
Consensus pattern (2 bp):
AT
Done.