Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009637.1 Corchorus capsularis cultivar CVL-1 contig09658, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69227

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2381--2462
38
2.1
38
81
4
92
28
10
18
42
1.84
8805--8916
56
2.0
55
98
1
215
26
14
18
40
1.89
15294--15336
19
2.4
17
78
14
50
41
9
4
44
1.57
16891--16920
15
2.0
15
93
0
51
20
10
26
43
1.83
27894--27935
19
2.2
19
100
0
84
45
19
0
35
1.50
51497--51535
2
20.0
2
89
5
62
48
2
0
48
1.15
55803--55851
24
2.0
24
100
0
98
46
8
24
20
1.77
56195--56458
132
2.0
132
97
0
501
31
20
28
20
1.97
65126--65153
10
2.8
10
100
0
56
17
50
0
32
1.47
66745--66798
29
2.0
27
82
10
65
12
22
27
37
1.91

Tables:   1

The End!