Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009648.1 Corchorus capsularis cultivar CVL-1 contig09669, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63063

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
481--525
2
22.5
2
93
0
72
46
0
2
51
1.13
8343--8502
60
2.7
60
86
1
212
37
16
17
28
1.91
8402--8499
31
3.2
31
67
11
85
38
20
15
25
1.92
8539--8636
31
3.2
31
67
11
85
27
17
16
38
1.91
8539--8697
60
2.7
60
86
3
216
27
17
18
36
1.93
10688--10757
2
36.0
2
81
16
67
50
2
1
45
1.25
14616--14643
5
5.6
5
100
0
56
17
0
0
82
0.68
19846--19877
15
2.1
15
100
0
64
53
0
6
40
1.26
22993--23284
109
2.7
109
92
4
464
37
11
1
49
1.50
25332--25384
27
2.0
27
89
7
83
41
7
1
49
1.42
56471--56497
2
13.5
2
100
0
54
51
0
0
48
1.00
62000--62173
85
2.1
81
87
4
249
47
5
16
31
1.68

Tables:   1

The End!