Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009649.1 Corchorus capsularis cultivar CVL-1 contig09670, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25312

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
975--1027
16
3.4
16
80
15
74
33
9
0
56
1.32
974--1033
31
1.9
32
96
3
113
31
10
1
56
1.42
2570--2602
1
33.0
1
100
0
66
0
0
0
100
0.00
19186--19634
50
9.2
50
90
5
724
35
18
22
23
1.96
19417--19490
38
1.9
38
97
0
139
40
20
14
24
1.90
19364--19634
88
2.9
92
89
7
397
36
19
20
23
1.95
19317--19591
138
2.0
138
97
0
514
36
19
21
22
1.96
19179--19634
188
2.4
191
91
4
729
35
18
21
23
1.95
19696--20105
228
1.8
221
88
3
631
31
15
19
33
1.93
22392--22489
48
2.0
48
80
7
110
37
16
21
24
1.93
22418--22528
48
2.3
48
92
0
177
33
18
21
27
1.96
23729--25300
333
4.7
332
81
4
1679
36
14
14
33
1.87
23564--25300
663
2.6
659
81
5
1920
37
14
14
34
1.86

Tables:   1

The End!