Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000965.1 Corchorus capsularis cultivar CVL-1 contig00965, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2769

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11--43
2
16.5
2
100
0
66
48
0
0
51
1.00
612--762
4
36.5
4
68
11
54
64
2
6
26
1.32
660--953
12
24.8
12
65
20
68
60
2
9
26
1.41
634--711
24
3.2
24
78
12
70
66
2
7
23
1.30
814--846
17
1.9
17
93
0
57
48
3
15
33
1.60
795--954
30
5.7
29
66
27
80
61
2
10
25
1.41
1226--1285
29
2.1
29
100
0
120
36
23
16
23
1.94
2472--2766
35
8.5
35
84
3
353
35
18
17
28
1.93

Tables:   1

The End!