Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009652.1 Corchorus capsularis cultivar CVL-1 contig09673, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19392

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
108--404
109
2.6
110
89
5
427
50
1
11
36
1.49
1161--1189
14
2.0
15
93
6
51
41
0
0
58
0.98
7602--7656
27
2.0
27
96
0
101
32
25
10
30
1.90
7777--8047
122
2.2
123
82
3
323
32
15
16
34
1.91
10234--10679
225
2.0
225
95
0
793
24
17
20
37
1.94
17400--19390
333
6.0
329
82
4
2155
33
15
15
36
1.89
17548--19390
667
2.8
664
83
4
2299
33
15
15
35
1.89

Tables:   1

The End!