Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009659.1 Corchorus capsularis cultivar CVL-1 contig09680, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19864

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1003--1055
29
2.0
27
85
14
74
56
16
7
18
1.63
1001--1067
27
2.4
29
82
5
84
61
14
5
17
1.53
10340--10387
17
2.8
17
84
6
62
27
14
16
41
1.87
12436--12473
12
3.4
11
86
13
51
57
0
0
42
0.98
12436--12473
17
2.2
17
90
9
60
57
0
0
42
0.98
19211--19850
7
93.3
7
95
3
1114
14
0
43
41
1.47

Tables:   1

The End!