Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009664.1 Corchorus capsularis cultivar CVL-1 contig09685, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18108

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
62--98
18
2.1
18
94
0
65
0
13
5
81
0.86
77--106
13
2.2
14
94
5
53
0
13
3
83
0.77
1627--1739
11
12.1
10
64
23
50
48
1
0
49
1.11
1679--1819
2
76.5
2
68
15
54
50
0
0
48
1.05
1642--1781
45
3.1
44
78
8
165
49
1
0
49
1.09
1679--1817
9
15.8
9
68
16
69
50
0
0
48
1.05
1686--1730
13
3.4
14
77
22
53
48
0
0
51
1.00
1664--1820
12
12.7
13
67
15
75
51
1
0
47
1.08
1679--1817
26
5.3
26
70
15
81
50
0
0
48
1.05
1642--1820
91
2.0
91
84
7
242
49
1
0
49
1.08
1697--1819
59
2.1
58
82
10
153
50
0
0
48
1.06

Tables:   1

The End!