Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009665.1 Corchorus capsularis cultivar CVL-1 contig09686, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25727

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4628--4675
24
2.0
24
91
0
78
37
33
6
22
1.80
8249--8296
25
1.9
25
91
0
78
33
6
16
43
1.73
12504--12529
12
2.2
12
100
0
52
50
0
0
50
1.00
12624--12664
21
2.0
21
100
0
82
12
29
24
34
1.91
12846--12908
33
1.9
33
100
0
126
47
17
3
31
1.63
15795--15957
88
1.8
89
92
1
274
48
11
25
14
1.77
15878--15932
21
2.5
21
80
11
58
60
5
20
14
1.54
21731--21848
60
2.0
60
96
0
218
29
21
11
38
1.88
25541--25596
13
4.3
13
77
6
60
28
1
0
69
0.98
25541--25596
4
14.0
4
81
10
62
28
1
0
69
0.98
25520--25596
39
2.1
38
79
15
90
28
1
2
67
1.12

Tables:   1

The End!