Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009666.1 Corchorus capsularis cultivar CVL-1 contig09687, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2917

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
82--158
16
4.8
16
80
6
93
54
32
10
2
1.48
99--177
33
2.4
33
89
2
115
54
29
10
6
1.58
81--174
49
1.9
49
89
4
145
54
29
10
5
1.57
79--189
49
2.3
48
84
7
143
54
28
9
7
1.60
327--413
32
2.7
32
82
3
104
40
37
9
12
1.75

Tables:   1

The End!