Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009667.1 Corchorus capsularis cultivar CVL-1 contig09688, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16355

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
984--1275
35
8.3
35
90
3
403
34
17
19
27
1.95
984--1275
105
2.8
105
90
4
455
34
17
19
27
1.95
1188--1902
35
20.1
35
84
8
819
34
21
14
29
1.93
984--1902
70
13.0
71
82
10
753
34
20
15
29
1.94
2012--2059
22
2.2
22
85
7
62
12
33
6
47
1.66
2983--3015
13
2.5
13
95
0
57
0
24
0
75
0.80
4297--4330
17
2.0
17
88
0
50
44
14
2
38
1.61
8242--8552
87
3.6
87
91
2
493
35
16
5
42
1.72
10056--10085
2
15.0
2
100
0
60
50
0
0
50
1.00
13532--13589
30
1.9
30
100
0
116
43
24
1
31
1.64

Tables:   1

The End!