Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009668.1 Corchorus capsularis cultivar CVL-1 contig09689, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26845

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1279--1303
5
5.0
5
100
0
50
80
0
20
0
0.72
2785--2827
20
2.1
21
86
4
61
39
20
18
20
1.93
2946--2981
14
2.6
14
95
0
63
47
0
0
52
1.00
3191--3222
12
2.7
12
100
0
64
53
31
15
0
1.43
5661--5688
14
2.0
14
100
0
56
50
14
7
28
1.69
8335--8380
22
2.0
22
91
4
74
0
17
2
80
0.81
8337--8381
18
2.8
16
84
15
65
0
13
2
84
0.72
13018--13052
2
18.0
2
94
5
63
51
0
0
48
1.00
25394--25418
11
2.3
11
100
0
50
36
8
28
28
1.85

Tables:   1

The End!