Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009669.1 Corchorus capsularis cultivar CVL-1 contig09690, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63958

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
493--517
2
12.5
2
100
0
50
52
0
0
48
1.00
15419--15499
33
2.5
33
85
4
101
19
40
27
12
1.87
17277--17311
12
2.9
12
95
0
61
20
60
2
17
1.49
30244--30338
48
2.0
48
91
4
156
48
5
9
36
1.58
37231--37264
16
2.1
16
100
0
68
17
17
11
52
1.73
43813--43847
14
2.5
14
95
0
61
17
20
14
48
1.81
45580--45615
18
2.0
18
88
0
54
8
16
38
36
1.79
53786--53845
31
1.9
31
100
0
120
38
16
10
35
1.82
55527--55578
26
2.0
25
81
3
59
57
5
5
30
1.46
56308--56367
31
1.9
31
100
0
120
38
16
10
35
1.82
59000--59034
13
2.6
13
95
4
61
40
14
14
31
1.86

Tables:   1

The End!