Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009672.1 Corchorus capsularis cultivar CVL-1 contig09693, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6029

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2780--2855
14
5.4
14
69
17
50
22
21
3
52
1.63
2794--2872
21
3.8
21
91
0
113
21
21
5
51
1.66
2897--2984
40
2.2
40
84
8
108
21
23
4
50
1.67
2919--3089
72
2.4
73
80
3
204
20
25
3
50
1.63
3026--3203
96
1.9
95
84
4
241
19
23
4
52
1.64
3022--3204
32
5.8
32
82
5
219
19
24
4
51
1.64

Tables:   1

The End!