Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009677.1 Corchorus capsularis cultivar CVL-1 contig09698, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21343

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10692--10738
20
2.3
20
85
3
58
21
10
27
40
1.86
14934--14988
24
2.5
21
75
16
56
38
18
16
27
1.92
15874--16259
194
2.0
195
91
3
625
48
12
14
23
1.78
16455--16484
13
2.3
13
100
0
60
46
0
0
53
1.00
17722--17762
2
20.5
2
84
0
55
51
4
2
41
1.36
18135--18175
2
20.5
2
100
0
82
51
0
48
0
1.00

Tables:   1

The End!