Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009678.1 Corchorus capsularis cultivar CVL-1 contig09699, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21875

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3175--3254
23
3.5
23
82
1
99
40
15
7
37
1.75
2992--3469
22
21.9
22
69
13
204
36
16
9
38
1.80
3436--3502
19
3.5
19
91
2
107
23
20
11
43
1.85
3608--3799
22
8.6
22
72
9
131
35
12
10
41
1.77
3583--3753
44
3.9
43
77
7
130
35
11
11
42
1.77
3608--3776
66
2.6
66
80
4
164
35
12
10
41
1.78
3583--3749
88
1.9
88
82
4
212
34
11
11
42
1.78
3860--3935
22
3.5
20
69
15
53
32
17
10
39
1.83
4012--4195
22
8.3
22
79
8
124
38
19
9
33
1.83
4460--4521
31
2.0
31
90
3
99
46
3
17
32
1.64
4465--4529
31
2.1
30
88
2
94
47
4
20
27
1.69
6356--6402
24
2.0
24
91
0
76
34
29
0
36
1.58
8586--8617
16
2.1
16
94
5
57
18
9
0
71
1.12
9250--9319
29
2.4
30
88
9
108
32
18
14
34
1.91
20424--20483
29
2.1
29
96
0
111
28
21
3
46
1.67

Tables:   1

The End!